Subcellular location

Subcellular location of proteins based on immunofluorescently stained cells. The tab-separated file includes the following columns: Ensembl gene identifier ("Gene"), name of gene ("Gene name"), gene reliability score ("Reliability"), enhanced locations ("Enhanced"), supported locations ("Supported"), Approved locations ("Approved"), uncertain locations ("Uncertain"), locations with single-cell variation in intensity ("Single-cell variation intensity"), locations with spatial single-cell variation ("Single-cell variation spatial"), locations with observed cell cycle dependency (type can be one or more of biological definition, custom data or correlation) ("Cell cycle dependency"), Gene Ontology Cellular Component term identifier ("GO id"). The data is based on The Human Protein Atlas version 24.0 and Ensembl version 109.

Subcellular location
GO term
Acrosome
Actin filamentsGO:0015629
AggresomeGO:0016235
Annulus
Basal bodyGO:0036064
Calyx
Cell JunctionsGO:0030054
Centriolar satelliteGO:0034451
CentrosomeGO:0005813
Cleavage furrowGO:0032154
Connecting piece
Cytokinetic bridgeGO:0045171
Cytoplasmic bodiesGO:0036464
CytosolGO:0005829
End piece
Endoplasmic reticulumGO:0005783
EndosomesGO:0005768
Equatorial segment
Flagellar centriole
Focal adhesion sitesGO:0005925
Golgi apparatusGO:0005794
Intermediate filamentsGO:0045111
KinetochoreGO:0000776
Lipid dropletsGO:0005811
LysosomesGO:0005764
Microtubule endsGO:1990752
MicrotubulesGO:0015630
Mid piece
MidbodyGO:0030496
Midbody ringGO:0090543
MitochondriaGO:0005739
Mitotic chromosomeGO:0005694
Mitotic spindleGO:0072686
Nuclear bodiesGO:0016604
Nuclear membraneGO:0031965
Nuclear specklesGO:0016607
NucleoliGO:0005730
Nucleoli fibrillar centerGO:0001650
Nucleoli rimGO:0005730
NucleoplasmGO:0005654
Perinuclear theca
PeroxisomesGO:0005777
Plasma membraneGO:0005886
Primary ciliumGO:0005929
Primary cilium tip
Primary cilium transition zone
Principal piece
Rods & Rings
VesiclesGO:0043231
Download: subcellular_locations.tsv.zip | 49 lines