Staining profiles for proteins in 20 human tumor tissues based on immunohistochemistry using tissue micro arrays. The tab-separated file includes Ensembl gene identifier , gene name , tumor name,and the number of patients annotated for different staining levels ("High", "Medium", "Low" & "Not detected"). The data is based on The Human Protein Atlas version 24.0 and Ensembl version 109.

cancer_data.tsv.zip

Log-rank P value for Kaplan-Meier analysis of correlation between mRNA expression level and patient survival in prognostic cohorts based on 21 cancers from TCGA and validation cohorts for 10 of the cancers. The tab-separated file includes Ensembl gene identifier, gene name, tumor name including cohort variant, and log-rank p values for patient survival and mRNA correlation. The data is based on The Human Protein Atlas version 24.0 and Ensembl version 109.

cancer_prognostic_data.tsv.zip

Transcript expression levels summarized per gene in 8384 samples from 21 different TCGA cancer types. The tab-separated file includes Ensembl gene identifier , analysed sample, cancer type and fragments per kilobase million ("FPKM"). The data is based on The Human Protein Atlas version 24.0 and Ensembl version 109.

rna_cancer_sample.tsv.gz

Based on MS data differential expression between 11 cancers and matched normal tissues was calculated through fold changes and evaluated by statistical tests (Wilcoxon rank-sum) with adjusted p-values for multiple testing (Bonferroni). The tab-separated file includes Ensembl gene identifier, gene name, tumor name, log2 fold change and adjusted p-value. The data is mapped with gene name to Ensembl version 109.

cancer_cptac.tsv.zip