HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:4.5 nTPM
HPA Brain:13.2 nTPM
GTEx:4.5 nTPM
FANTOM5:15.7 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:15.1 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA070480
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.6
2621 Female, age 67, right hemisphere 14.8
1855 Male, age 76, left hemisphere 14.7
1898 Male, age 80, left hemisphere 14.5
2148 Female, age 91, left hemisphere 10.5
1911 Female, age 85, right hemisphere 9.4
2529 Female, age 94, left hemisphere 5.9
Dentate gyrus
nTPM: 11.9
1927 Female, age 91, both hemispheres 15.2
2010 Male, age 76, both hemispheres 13.8
2530 Female, age 94, left hemisphere 13.4
2246 Female, age 85, both hemispheres 10.7
2528 Male, age 74, both hemispheres 9.4
2531 Female, age 67, both hemispheres 9.2
Entorhinal gyrus
nTPM: 13.2
2613 Female, age 94, left hemisphere 24.6
1938 Female, age 85, left hemisphere 13.6
1787 Male, age 76, left hemisphere 13.2
2764 Male, age 80, right hemisphere 10.9
2686 Male, age 75, right hemisphere 8.6
2117 Female, age 91, right hemisphere 8.2
Hippocampus, CA1
nTPM: 11.5
2749 Male, age 80, left hemisphere 18.4
1873 Female, age 85, both hemispheres 14.0
2045 Male, age 76, both hemispheres 9.3
2527 Male, age 74, both hemispheres 8.8
2082 Female, age 91, right hemisphere 7.2
Hippocampus, CA2
nTPM: 12.5
1963 Male, age 80, left hemisphere 18.4
1892 Male, age 76, both hemispheres 17.0
2437 Female, age 94, left hemisphere 14.9
1940 Female, age 85, left hemisphere 9.2
2249 Male, age 74, both hemispheres 7.8
2113 Female, age 91, right hemisphere 7.3
Hippocampus, CA3
nTPM: 9.1
1867 Male, age 76, both hemispheres 11.7
2861 Female, age 67, both hemispheres 11.3
2137 Male, age 80, left hemisphere 10.5
1891 Female, age 85, both hemispheres 8.5
2436 Male, age 74, both hemispheres 7.7
2620 Female, age 94, left hemisphere 5.2
Parahippocampal cortex
nTPM: 11.6
1990 Female, age 91, right hemisphere 14.5
2622 Female, age 67, right hemisphere 13.4
2250 Female, age 67, right hemisphere 12.3
2245 Female, age 91, both hemispheres 12.2
2532 Female, age 72, left hemisphere 11.4
1933 Female, age 85, both hemispheres 11.3
1850 Male, age 80, both hemispheres 11.2
2692 Male, age 74, both hemispheres 10.5
2693 Female, age 94, both hemispheres 10.4
2018 Male, age 76, both hemispheres 8.9
Perirhinal gyrus
nTPM: 11.9
1847 Female, age 91, left hemisphere 16.2
2521 Female, age 94, right hemisphere 12.5
1841 Female, age 85, right hemisphere 11.6
1794 Male, age 80, right hemisphere 10.2
2848 Male, age 76, right hemisphere 8.8
Subiculum
nTPM: 10.9
2438 Female, age 94, left hemisphere 13.6
1977 Female, age 85, both hemispheres 11.4
2042 Male, age 76, both hemispheres 11.4
2619 Male, age 74, both hemispheres 10.6
1901 Male, age 80, both hemispheres 9.6
2729 Female, age 91, right hemisphere 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 4.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.5
Samples: 197

Max nTPM: 14.7
Min nTPM: 1.1
Std nTPM: 2.5
Median nTPM: 3.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 14.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 14.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 13.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 12.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 12.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 11.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 10.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 10.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 10.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 9.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 8.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 15.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 15.7
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 13.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 15.7
Pig sample Sample description nTPM
Subiculum
nTPM: 7.9
Samples: 4

Max nTPM: 9.7
Min nTPM: 6.8
Sample A Female 9.7
Sample B Female 7.9
Sample C Male 6.8
Sample D Male 7.3
Dorsal hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 16.3
Min nTPM: 10.7
Sample A Female 16.3
Sample B Female 13.0
Sample C Male 10.7
Sample D Male 12.2
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 19.5
Min nTPM: 11.4
Sample A Female 15.2
Sample B Female 16.6
Sample C Male 11.4
Sample D Male 19.5
Ventral hippocampus
nTPM: 10.8
Samples: 4

Max nTPM: 18.6
Min nTPM: 7.4
Sample A Female 7.4
Sample B Female 7.8
Sample C Male 9.2
Sample D Male 18.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 15.7
Min nTPM: 13.8
Sample A Male 15.7
Sample B Male 13.8
Sample C Female 15.4
Sample D Female 15.4
Hippocampal formation
nTPM: 14.2
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.3
Sample A Male 12.9
Sample B Male 14.7
Sample C Female 17.0
Sample D Female 12.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
69818018 Antisense, RP_050510_04_C03, Mouse strain C57BL/6J (56 days, male) 0.4

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