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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
48.4
nTPM
FANTOM5:
29.2
Scaled Tags Per Million
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
48.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 34.6
1984
Male, age 76, both hemispheres
46.2
2301
Female, age 85, both hemispheres
36.5
2188
Female, age 91, both hemispheres
30.4
2090
Male, age 80, both hemispheres
25.2
Dorsal cochlear nucleus nTPM: 40.9
2802
Male, age 74, right hemisphere
46.0
2370
Male, age 61, both hemispheres
45.0
2187
Female, age 91, both hemispheres
40.2
2058
Male, age 76, both hemispheres
37.2
2378
Male, age 80, both hemispheres
36.2
Dorsal tegmental nucleus nTPM: 42.1
2358
Male, age 61, both hemispheres
46.5
1936
Male, age 76, left hemisphere
44.3
2083
Male, age 80, both hemispheres
43.6
2326
Male, age 74, both hemispheres
33.9
Dorsolateral tegmental area nTPM: 41.8
2141
Male, age 76, both hemispheres
48.2
2337
Male, age 61, both hemispheres
47.9
2654
Male, age 80, both hemispheres
47.4
2751
Female, age 85, both hemispheres
34.4
2360
Male, age 74, both hemispheres
30.8
Kolliker-Fuse nucleus nTPM: 47.5
2163
Male, age 80, both hemispheres
57.0
2315
Male, age 76, right hemisphere
46.3
2793
Female, age 91, left hemisphere
39.1
Lateral lemniscal nuclei nTPM: 47.3
2036
Male, age 80, both hemispheres
54.9
2169
Male, age 76, both hemispheres
50.9
2453
Male, age 74, right hemisphere
45.9
2320
Female, age 91, left hemisphere
45.1
2746
Female, age 85, left hemisphere
39.7
Lateral parabrachial nucleus nTPM: 39.5
2139
Female, age 85, right hemisphere
45.6
2790
Male, age 61, both hemispheres
43.9
2013
Male, age 80, both hemispheres
34.7
2792
Male, age 76, both hemispheres
34.0
Lateral vestibular nucleus nTPM: 48.1
2184
Male, age 76, both hemispheres
53.9
2311
Male, age 80, both hemispheres
42.3
Locus coeruleus nTPM: 43.1
1980
Male, age 76, both hemispheres
50.4
2123
Female, age 91, both hemispheres
48.9
2162
Male, age 80, both hemispheres
46.4
2317
Female, age 72, unknown
45.4
2014
Male, age 55, unknown
42.4
2720
Male, age 74, both hemispheres
40.8
2788
Male, age 74, unknown
27.5
Medial parabrachial nucleus nTPM: 44.9
2156
Male, age 61, both hemispheres
60.2
2786
Male, age 76, both hemispheres
45.1
2170
Female, age 91, both hemispheres
42.2
2463
Female, age 85, right hemisphere
40.6
2854
Male, age 80, both hemispheres
36.5
Medial periolivary nuclei nTPM: 40.2
2171
Female, age 85, both hemispheres
56.4
2063
Male, age 76, both hemispheres
44.6
2458
Female, age 91, both hemispheres
41.2
2081
Male, age 80, both hemispheres
30.8
2791
Male, age 74, right hemisphere
28.0
Motor facial nucleus nTPM: 44.8
2062
Male, age 76, both hemispheres
52.8
2327
Male, age 80, both hemispheres
47.3
2795
Female, age 91, both hemispheres
46.0
2126
Male, age 61, both hemispheres
45.6
2697
Female, age 85, both hemispheres
39.2
2365
Male, age 74, right hemisphere
38.2
Motor trigeminal nucleus nTPM: 45.5
2335
Male, age 61, both hemispheres
49.7
2560
Male, age 74, both hemispheres
47.8
2309
Male, age 76, both hemispheres
46.7
2079
Male, age 80, both hemispheres
42.6
2321
Female, age 91, both hemispheres
40.7
Nuclei of the trapezoid body nTPM: 48.0
2735
Female, age 85, both hemispheres
53.0
2159
Male, age 61, both hemispheres
50.4
1983
Male, age 76, both hemispheres
49.8
2166
Male, age 80, both hemispheres
47.3
2368
Female, age 91, both hemispheres
39.4
Nucleus raphe magnus nTPM: 48.4
2160
Male, age 61, both hemispheres
55.8
2172
Female, age 85, both hemispheres
55.7
2328
Male, age 80, both hemispheres
48.3
2051
Male, age 76, both hemispheres
46.4
2455
Male, age 74, both hemispheres
45.9
2459
Female, age 91, both hemispheres
38.3
Paramedian reticular nucleus nTPM: 41.4
2313
Male, age 61, both hemispheres
52.5
2050
Female, age 85, both hemispheres
43.4
2057
Male, age 80, both hemispheres
41.3
2052
Male, age 76, both hemispheres
28.3
Pedunculopontine tegmental nucleus nTPM: 38.4
2334
Male, age 80, both hemispheres
43.3
1921
Female, age 85, both hemispheres
40.1
2338
Male, age 61, both hemispheres
31.9
Pontine nuclei nTPM: 46.2
2787
Female, age 85, both hemispheres
67.7
1968
Male, age 76, left hemisphere
52.5
1863
Male, age 55, unknown
52.3
2109
Female, age 72, unknown
48.4
2115
Male, age 80, left hemisphere
42.7
2727
Male, age 61, right hemisphere
39.1
2319
Female, age 91, both hemispheres
33.4
2454
Male, age 74, left hemisphere
33.4
Pontine raphe nucleus nTPM: 37.9
2853
Male, age 76, midline
43.1
2122
Female, age 85, midline
32.7
Posteroventral cochlear nucleus nTPM: 36.1
2752
Female, age 85, both hemispheres
45.4
2070
Male, age 76, both hemispheres
43.8
2371
Male, age 61, both hemispheres
42.4
2341
Male, age 80, both hemispheres
24.8
2135
Female, age 91, both hemispheres
24.1
Principal sensory trigeminal nucleus nTPM: 47.1
2324
Male, age 76, both hemispheres
56.0
2158
Male, age 61, both hemispheres
53.2
2008
Male, age 80, left hemisphere
42.1
2367
Female, age 91, left hemisphere
37.1
Reticular pontine nucleus, caudal nTPM: 43.9
2332
Male, age 80, right hemisphere
56.6
2092
Male, age 76, both hemispheres
43.0
2457
Female, age 91, both hemispheres
38.8
2559
Male, age 74, both hemispheres
37.2
Reticular pontine nucleus, oral nTPM: 38.9
2167
Male, age 76, both hemispheres
45.0
1939
Male, age 80, both hemispheres
42.8
2012
Female, age 85, both hemispheres
39.0
2366
Female, age 91, both hemispheres
34.2
2361
Male, age 74, both hemispheres
33.6
Reticulotegmental nucleus nTPM: 47.3
2452
Male, age 74, both hemispheres
49.4
2333
Male, age 80, both hemispheres
49.1
2325
Male, age 76, both hemispheres
46.7
2322
Female, age 91, both hemispheres
44.1
Spinal trigeminal nucleus, oral nTPM: 47.0
2164
Male, age 80, both hemispheres
52.3
2737
Female, age 85, both hemispheres
46.1
1978
Male, age 76, both hemispheres
42.5
Subcoeruleus area nTPM: 41.9
2323
Female, age 91, left hemisphere
50.2
2451
Male, age 74, both hemispheres
45.8
1958
Male, age 80, both hemispheres
42.6
2089
Male, age 76, left hemisphere
38.3
2369
Female, age 85, left hemisphere
32.8
Superior olive nTPM: 40.3
2329
Male, age 80, right hemisphere
45.7
2561
Female, age 91, both hemispheres
44.5
1875
Female, age 85, both hemispheres
43.3
2020
Male, age 76, both hemispheres
37.1
2364
Male, age 74, right hemisphere
31.0
Ventral periolivary nuclei nTPM: 38.9
2165
Male, age 80, both hemispheres
51.7
2794
Female, age 91, left hemisphere
36.2
2023
Male, age 76, both hemispheres
34.8
2130
Female, age 85, both hemispheres
32.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 44.0
2161
Male, age 80, both hemispheres
46.7
1959
Male, age 76, both hemispheres
45.3
2449
Male, age 74, both hemispheres
44.8
2840
Female, age 85, both hemispheres
44.1
2456
Female, age 91, both hemispheres
43.1
2359
Male, age 61, both hemispheres
40.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
