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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
74.6
nTPM
HPA Brain:
65.4
nTPM
GTEx:
74.6
nTPM
FANTOM5:
96.0
Scaled Tags Per Million
Pig:
61.5
nTPM
Mouse:
192.7
nTPM
Allen mouse:
6.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
65.4
Sample id
Sample description
nTPM
Amygdala nTPM: 65.1
2814
Male, age 76, right hemisphere
82.7
2514
Male, age 75, right hemisphere
67.6
1987
Female, age 91, left hemisphere
61.1
2517
Female, age 94, left hemisphere
58.4
2695
Female, age 67, right hemisphere
55.9
Basal amygdala nTPM: 58.7
2110
Male, age 80, left hemisphere
65.7
2243
Female, age 91, right hemisphere
63.6
1955
Male, age 76, both hemispheres
62.0
2609
Male, age 75, right hemisphere
61.6
2685
Female, age 94, left hemisphere
51.7
2827
Female, age 67, right hemisphere
47.2
Central amygdala nTPM: 65.4
1905
Male, age 76, both hemispheres
78.0
2826
Female, age 94, left hemisphere
69.8
2239
Male, age 80, left hemisphere
64.4
2515
Male, age 75, right hemisphere
59.8
2701
Female, age 91, right hemisphere
55.2
Corticomedial amygdala nTPM: 59.0
2829
Male, age 80, left hemisphere
66.7
2240
Male, age 76, both hemispheres
61.8
2242
Female, age 91, right hemisphere
61.5
2428
Male, age 75, right hemisphere
60.1
2429
Female, age 94, left hemisphere
56.6
2535
Female, age 67, right hemisphere
47.3
Lateral amygdala nTPM: 61.0
1883
Male, age 76, both hemispheres
73.2
2534
Female, age 94, left hemisphere
68.3
2516
Male, age 75, right hemisphere
63.2
2830
Female, age 67, right hemisphere
59.5
2256
Male, age 80, left hemisphere
51.7
2255
Female, age 91, right hemisphere
49.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
74.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 74.6
Samples: 152
Max nTPM: 148.6
Min nTPM: 42.6
Std nTPM: 19.7
Median nTPM: 72.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
148.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
147.6
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
141.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
122.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
122.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
117.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
116.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
115.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
112.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
107.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
101.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
100.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
99.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
98.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
98.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
97.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
96.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
96.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
95.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
95.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
95.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
95.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
94.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
93.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
91.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
90.4
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
90.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
90.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
89.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
89.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
88.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
88.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
87.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
87.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
86.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
85.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
84.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
83.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
83.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
83.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
83.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
83.2
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
83.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
82.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
82.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
81.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
81.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
81.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
81.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
80.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
80.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
79.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
78.9
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
78.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
77.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
76.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
75.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
75.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
75.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
75.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
75.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
75.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
74.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
74.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
74.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
74.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
74.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
74.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
74.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
74.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
73.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
73.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
73.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
73.2
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
72.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
72.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
72.4
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
71.8
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
71.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
71.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
71.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
71.1
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
70.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
70.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
70.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
69.6
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
69.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
68.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
68.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
68.5
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
68.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
67.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
67.5
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
67.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
67.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
66.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
66.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
65.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
65.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
65.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
65.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
64.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
64.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
64.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
63.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
63.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
62.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
62.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
61.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
61.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
61.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
61.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
61.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
61.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
60.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
60.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
59.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
59.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
59.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
59.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
58.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
57.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
57.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
57.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
57.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
56.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
55.9
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
55.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
53.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
53.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
53.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
52.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
52.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
52.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
52.5
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
52.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
51.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
50.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
50.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
50.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
49.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
49.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
48.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
48.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
47.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
47.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
46.8
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
46.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
45.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
43.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
42.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
192.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 192.7
Samples: 4
Max nTPM: 209.4
Min nTPM: 186.6
Sample A
Male
186.6
Sample B
Male
209.4
Sample C
Female
187.1
Sample D
Female
187.8
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.