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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
197.5
nTPM
HPA Brain:
154.0
nTPM
GTEx:
197.5
nTPM
FANTOM5:
55.8
Scaled Tags Per Million
Pig:
44.9
nTPM
Mouse:
170.5
nTPM
Allen mouse:
13.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
154.0
Sample id
Sample description
nTPM
Amygdala nTPM: 111.3
2814
Male, age 76, right hemisphere
142.1
1987
Female, age 91, left hemisphere
128.4
2517
Female, age 94, left hemisphere
123.0
2514
Male, age 75, right hemisphere
88.8
2695
Female, age 67, right hemisphere
74.1
Basal amygdala nTPM: 154.0
2243
Female, age 91, right hemisphere
184.2
2827
Female, age 67, right hemisphere
164.6
2685
Female, age 94, left hemisphere
163.7
2110
Male, age 80, left hemisphere
148.0
1955
Male, age 76, both hemispheres
132.5
2609
Male, age 75, right hemisphere
131.0
Central amygdala nTPM: 142.4
2826
Female, age 94, left hemisphere
197.0
2239
Male, age 80, left hemisphere
155.9
1905
Male, age 76, both hemispheres
127.2
2515
Male, age 75, right hemisphere
117.9
2701
Female, age 91, right hemisphere
113.8
Corticomedial amygdala nTPM: 145.2
2829
Male, age 80, left hemisphere
178.4
2242
Female, age 91, right hemisphere
159.5
2535
Female, age 67, right hemisphere
152.3
2429
Female, age 94, left hemisphere
138.0
2428
Male, age 75, right hemisphere
123.3
2240
Male, age 76, both hemispheres
119.8
Lateral amygdala nTPM: 141.5
2534
Female, age 94, left hemisphere
224.1
2256
Male, age 80, left hemisphere
149.5
2255
Female, age 91, right hemisphere
134.1
1883
Male, age 76, both hemispheres
130.6
2830
Female, age 67, right hemisphere
125.4
2516
Male, age 75, right hemisphere
85.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
197.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 197.5
Samples: 152
Max nTPM: 542.5
Min nTPM: 9.7
Std nTPM: 87.7
Median nTPM: 191.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
542.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
495.5
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
381.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
378.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
377.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
368.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
359.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
344.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
327.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
321.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
320.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
317.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
312.9
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
310.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
310.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
308.6
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
306.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
304.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
300.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
300.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
298.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
288.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
284.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
284.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
283.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
281.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
280.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
277.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
273.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
265.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
264.9
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
260.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
259.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
257.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
257.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
254.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
253.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
252.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
249.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
245.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
242.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
242.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
240.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
239.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
239.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
237.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
236.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
235.7
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
233.9
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
232.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
229.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
228.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
226.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
226.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
226.5
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
224.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
224.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
224.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
222.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
221.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
220.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
218.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
217.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
211.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
207.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
206.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
204.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
203.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
203.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
200.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
199.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
198.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
194.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
193.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
192.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
192.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
191.7
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
189.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
187.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
187.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
185.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
184.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
182.9
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
182.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
181.4
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
179.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
179.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
178.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
178.0
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
174.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
173.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
168.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
165.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
164.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
163.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
162.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
161.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
158.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
155.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
155.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
151.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
148.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
147.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
145.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
145.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
143.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
143.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
141.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
140.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
140.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
138.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
135.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
133.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
133.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
132.8
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
130.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
130.3
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
127.9
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
126.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
126.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
118.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
117.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
116.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
113.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
113.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
113.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
110.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
109.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
109.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
105.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
101.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
101.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
97.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
96.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
96.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
96.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
95.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
95.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
95.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
92.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
88.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
84.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
81.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
78.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
68.5
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
67.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
54.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
54.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
50.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
21.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
9.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
170.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 170.5
Samples: 4
Max nTPM: 178.2
Min nTPM: 162.1
Sample A
Male
173.5
Sample B
Male
168.3
Sample C
Female
178.2
Sample D
Female
162.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.