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RPL41
HPA
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  • SUMMARY

  • TISSUE

  • BRAIN

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  • BLOOD

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  • STRUCTURE

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  • RPL41
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
AND
VALIDATION
Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
Cancer methods
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL41 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the pTPM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (pTPM) was examined. The best expression cut-off refers the pTPM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4969.61
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6600.8
Number of samples 497
Samples
Sample Description pTPM
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 23791.6
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 21958.6
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 17655.6
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 16945.3
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 16259.8
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 14211.6
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 14028.5
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 14014.9
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 13961.9
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 13416.9
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 13378.6
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 13351.1
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 13013.3
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 12874.5
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 12836.3
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 12795.7
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 12753.5
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 12662.1
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 12565.7
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 12526.7
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 12517.9
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 12067.2
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 11998.9
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 11799.1
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 11688.2
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 11686.3
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 11582.3
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 11430.5
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 11339.1
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 11207.7
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 11134.5
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 11125.0
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 11051.7
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 11026.3
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 10868.1
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 10853.6
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 10618.5
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 10311.5
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 10296.6
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 10286.4
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 10182.5
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 10169.9
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 10055.2
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 9998.3
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 9958.8
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 9956.1
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 9914.4
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 9867.1
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 9723.7
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 9632.0
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 9606.7
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 9574.2
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 9543.9
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 9525.9
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 9469.4
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 9383.5
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 9360.8
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 9336.8
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 9334.2
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 9301.9
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 9293.3
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 9267.9
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 9262.8
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 9259.7
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 9211.6
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 9200.0
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 9179.2
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 9126.1
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 9085.4
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 9063.5
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 9044.1
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 9032.0
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 9028.4
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 9007.8
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 8990.1
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 8928.9
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 8864.8
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 8837.6
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 8807.2
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 8798.2
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 8790.2
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 8777.7
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 8754.0
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 8742.8
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 8698.5
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 8693.8
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 8689.2
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 8672.2
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 8650.6
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 8636.3
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 8634.3
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 8611.7
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 8606.1
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 8549.2
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 8433.0
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 8397.0
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 8299.4
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 8275.4
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 8270.1
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 8230.9
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 8221.5
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 8177.5
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 8131.5
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 8101.6
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 8090.3
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 8075.3
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 8073.7
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 8072.7
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 8055.8
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 7995.3
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 7979.6
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 7942.5
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 7935.8
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 7928.0
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 7911.1
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 7881.7
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 7862.9
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 7861.4
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 7822.0
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 7805.9
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 7790.8
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 7789.9
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 7784.3
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 7779.2
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 7775.5
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 7762.0
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 7755.7
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 7743.9
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 7716.4
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 7709.9
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 7646.8
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 7629.9
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 7568.5
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 7543.6
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 7528.5
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 7469.7
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 7461.6
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 7431.3
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 7417.9
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 7384.8
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 7384.3
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 7377.1
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 7376.0
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 7372.1
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 7359.6
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 7351.1
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 7339.7
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 7334.3
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 7328.2
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 7324.4
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 7312.7
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 7312.4
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 7309.7
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 7297.3
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 7288.1
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 7286.3
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 7234.8
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 7223.0
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 7191.6
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 7177.2
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 7167.2
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 7145.5
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 7138.9
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 7130.0
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 7083.0
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 7062.3
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 7055.7
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 7023.7
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 6994.2
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 6984.7
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 6982.5
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 6977.0
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 6968.4
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 6949.5
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 6940.8
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 6930.1
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 6927.0
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 6912.7
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 6900.1
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 6897.0
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 6883.9
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 6883.0
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 6880.2
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 6867.1
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 6847.9
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 6829.2
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 6824.4
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 6812.7
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 6767.0
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 6765.6
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 6756.4
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 6731.9
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 6728.6
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 6726.6
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 6722.5
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 6697.2
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 6645.9
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 6632.0
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 6623.4
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 6610.6
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 6609.4
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 6587.4
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 6582.8
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 6580.8
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 6558.3
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 6534.3
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 6528.2
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 6523.4
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 6514.6
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 6513.5
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 6512.0
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 6502.7
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 6502.5
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 6497.8
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 6495.0
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 6492.0
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 6482.9
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 6479.7
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 6473.1
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 6466.8
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 6465.1
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 6463.5
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 6445.9
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 6437.4
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 6415.1
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 6404.0
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 6401.4
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 6397.5
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 6394.8
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 6371.9
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 6353.2
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 6343.2
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 6342.6
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 6332.4
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 6308.6
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 6304.7
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 6301.2
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 6292.1
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 6289.0
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 6280.6
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 6270.1
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 6266.0
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 6260.3
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 6230.2
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 6224.1
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 6220.4
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 6210.8
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 6208.7
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 6206.1
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 6198.2
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 6189.6
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 6132.0
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 6098.0
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 6095.5
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 6090.8
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 6082.3
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 6026.0
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 6009.1
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 5997.4
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 5991.1
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 5979.7
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 5976.9
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 5957.0
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 5947.5
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 5940.6
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 5917.8
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 5894.1
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 5872.1
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 5857.8
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 5857.6
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 5846.9
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 5829.7
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 5823.6
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 5813.3
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 5813.0
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 5807.3
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 5804.9
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 5792.1
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 5770.3
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 5748.0
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 5732.8
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 5724.1
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 5717.1
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 5715.1
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 5712.2
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 5709.5
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 5698.2
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 5697.6
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 5688.8
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 5669.9
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 5657.6
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 5644.7
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 5644.3
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 5642.6
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 5590.7
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 5583.9
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 5577.8
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 5550.0
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 5544.9
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 5543.8
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 5536.3
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 5524.8
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 5520.2
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 5505.8
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 5503.1
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 5503.1
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 5496.0
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 5495.6
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 5476.4
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 5475.0
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 5469.8
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 5465.2
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 5449.6
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 5442.8
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 5440.9
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 5406.4
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 5402.8
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 5387.5
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 5361.6
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 5357.3
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 5317.7
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 5314.7
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 5304.0
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 5299.1
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 5292.9
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 5292.3
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 5273.8
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 5262.9
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 5251.8
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 5231.9
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 5214.7
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 5214.1
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 5187.9
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 5172.8
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 5155.0
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 5150.8
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 5144.1
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 5143.8
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 5137.5
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 5133.7
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 5128.6
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 5114.7
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 5106.3
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 5088.0
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 5077.4
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 5077.3
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 5073.7
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 5070.0
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 5059.7
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 5056.2
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 5051.0
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 5047.9
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 5031.4
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 5025.9
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 5025.6
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 5005.3
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 4997.5
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 4995.4
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 4981.8
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 4980.6
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 4980.6
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 4975.5
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 4971.1
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 4969.6
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 4947.9
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 4939.4
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 4932.1
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 4923.2
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 4902.8
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 4900.0
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 4897.2
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 4874.4
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 4866.0
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 4806.1
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 4796.3
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 4795.6
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 4792.6
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 4784.2
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 4774.0
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 4769.1
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 4723.6
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 4719.4
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 4718.2
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 4715.3
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 4712.8
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 4696.6
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 4695.5
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 4693.8
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 4682.6
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 4673.9
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 4627.0
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 4614.7
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 4612.2
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 4583.7
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 4568.9
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 4560.6
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 4540.7
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 4531.0
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 4515.7
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 4495.3
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 4476.1
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 4474.7
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 4441.9
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 4421.9
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 4413.3
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 4410.7
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 4387.4
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 4384.1
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 4378.4
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 4369.6
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 4350.5
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 4333.6
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 4323.1
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 4312.9
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 4281.3
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 4272.0
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 4262.2
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 4258.4
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 4257.0
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 4252.5
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 4237.5
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 4224.8
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 4217.5
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 4216.5
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 4207.6
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 4189.7
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 4142.7
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 4141.3
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 4137.8
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 4118.3
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 4117.2
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 4104.2
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 4089.8
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 4085.5
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 4085.5
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 4069.4
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 4038.2
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 4023.3
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 3998.4
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 3962.1
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 3956.3
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 3945.8
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 3943.1
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 3941.2
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 3938.0
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 3936.7
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 3928.1
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 3925.0
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 3903.4
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 3888.7
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 3862.7
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 3845.6
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 3825.3
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 3813.6
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 3809.2
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 3805.4
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 3795.6
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 3784.5
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 3783.8
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 3703.7
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 3673.5
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 3664.6
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 3655.7
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 3569.0
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 3563.8
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 3562.4
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 3544.3
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 3543.1
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 3539.2
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 3531.1
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 3527.1
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 3496.5
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 3472.5
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 3472.5
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 3468.8
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 3445.9
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 3404.7
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 3389.8
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 3315.5
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 3291.0
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 3214.1
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 3136.3
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 3135.6
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 3109.8
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 3093.9
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 3089.1
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 2999.8
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 2910.5
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 2908.1
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 2885.0
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 2793.7
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 2700.1
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 2649.9
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 2596.0
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 2470.9
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 2101.1
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 1156.6
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL41 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the pTPM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (pTPM) was examined. The best expression cut-off refers the pTPM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4858.23
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6058.6
Number of samples 105
Samples
Sample Description pTPM
L851 70 years, male, stage:Stage IB, dead, 1315 days 12085.2
L773 64 years, female, stage:Stage IV, dead, 311 days 10712.4
L473 66 years, female, stage:Stage IA, alive, 3021 days 9771.7
L603 70 years, female, stage:Stage IB, dead, 972 days 9597.7
L827 70 years, male, stage:Stage IIB, dead, 1105 days 9173.3
L630 65 years, female, stage:Stage IA, dead, 1733 days 9148.5
L662 66 years, male, stage:Stage IA, dead, 865 days 8801.3
L551 62 years, male, stage:Stage IA, alive, 2924 days 8777.8
L791 66 years, female, stage:Stage IIIA, dead, 368 days 8676.9
L561 62 years, female, stage:Stage IA, alive, 2543 days 8516.7
L616 54 years, male, stage:Stage IA, dead, 410 days 8470.7
L731 59 years, female, stage:Stage IA, dead, 964 days 8419.9
L557 81 years, female, stage:Stage IB, alive, 2580 days 8186.2
L850 77 years, male, stage:Stage IIIA, dead, 997 days 7951.9
L703 71 years, male, stage:Stage IIA, dead, 1137 days 7888.0
L842 62 years, female, stage:Stage IB, alive, 2005 days 7828.1
L683 77 years, female, stage:Stage IIA, dead, 612 days 7791.1
L462 67 years, male, stage:Stage IIIA, dead, 568 days 7705.2
L867 62 years, female, stage:Stage IIIA, dead, 317 days 7507.2
L602 69 years, female, stage:Stage IA, alive, 2277 days 7479.2
L601 75 years, male, stage:Stage IB, dead, 2068 days 7472.6
L810 64 years, female, stage:Stage IIIA, dead, 625 days 7295.8
L890 56 years, female, stage:Stage IIB, dead, 1264 days 7170.0
L829 76 years, male, stage:Stage IA, alive, 2173 days 7027.1
L871 74 years, male, stage:Stage IB, dead, 873 days 7012.6
L816 73 years, female, stage:Stage IIA, dead, 353 days 6929.2
L569 76 years, female, stage:Stage IA, alive, 2531 days 6678.3
L885 62 years, female, stage:Stage IA, alive, 1618 days 6598.3
L746 64 years, female, stage:Stage IIIA, dead, 594 days 6586.0
L484 64 years, female, stage:Stage IA, alive, 2895 days 6572.5
L766 59 years, male, stage:Stage IB, alive, 1793 days 6526.6
L606 55 years, male, stage:Stage IA, alive, 2336 days 6523.8
L532 69 years, female, stage:Stage IA, dead, 301 days 6479.3
L613 72 years, male, stage:Stage IIIA, dead, 19 days 6401.6
L638 65 years, male, stage:Stage IA, alive, 2076 days 6378.0
L605 74 years, female, stage:Stage IA, alive, 2460 days 6338.8
L439 80 years, male, stage:Stage IIB, dead, 2773 days 6318.6
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 6289.9
L565 59 years, female, stage:Stage IB, dead, 543 days 6275.7
L875 69 years, female, stage:Stage IA, alive, 1675 days 6164.7
L689 69 years, male, stage:Stage IA, alive, 1943 days 6031.5
L782 73 years, female, stage:Stage IIB, alive, 3371 days 6020.4
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 5959.5
L673 74 years, female, stage:Stage IA, dead, 568 days 5925.2
L546 57 years, male, stage:Stage IA, dead, 973 days 5910.1
L626 76 years, female, stage:Stage IA, dead, 1994 days 5873.9
L682 64 years, female, stage:Stage IIB, dead, 840 days 5836.4
L566 58 years, male, stage:Stage IB, alive, 2489 days 5797.5
L865 75 years, female, stage:Stage IIB, alive, 1927 days 5792.5
L877 70 years, female, stage:Stage IA, alive, 1599 days 5721.3
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 5710.5
L808 48 years, female, stage:Stage IA, alive, 3001 days 5691.3
L828 68 years, female, stage:Stage IIB, alive, 2222 days 5689.3
L400 78 years, male, stage:Stage IIA, dead, 1233 days 5684.2
L887 77 years, male, stage:Stage IA, dead, 374 days 5662.9
L800 66 years, female, stage:Stage IA, dead, 2417 days 5634.7
L458 76 years, female, stage:Stage IA, dead, 223 days 5603.7
L617 68 years, male, stage:Stage IIIA, dead, 238 days 5569.0
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 5560.0
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 5552.3
L749 49 years, female, stage:Stage IIIA, dead, 189 days 5546.6
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 5546.3
L620 70 years, female, stage:Stage IIIA, dead, 338 days 5514.5
L545 60 years, female, stage:Stage IA, alive, 2874 days 5492.2
L688 57 years, male, stage:Stage IIIA, dead, 789 days 5436.2
L530 76 years, female, stage:Stage IIA, dead, 308 days 5402.2
L826 45 years, female, stage:Stage IV, dead, 935 days 5391.5
L531 74 years, male, stage:Stage IB, dead, 928 days 5376.6
L802 62 years, female, stage:Stage IA, dead, 773 days 5345.3
L879 75 years, male, stage:Stage IV, dead, 873 days 5320.3
L656 58 years, male, stage:Stage IA, alive, 2227 days 5316.7
L404 74 years, female, stage:Stage IIA, dead, 2318 days 5307.2
L738 74 years, female, stage:Stage IB, dead, 1314 days 5273.4
L446 71 years, female, stage:Stage IIB, dead, 415 days 5217.2
L832 65 years, female, stage:Stage IA, alive, 2145 days 5124.9
L678 65 years, female, stage:Stage IB, dead, 1114 days 4971.2
L873 62 years, female, stage:Stage IA, alive, 1740 days 4904.9
L728 77 years, male, stage:Stage IIB, dead, 1128 days 4886.5
L599 80 years, male, stage:Stage IB, dead, 2083 days 4863.2
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 4853.3
L493 56 years, female, stage:Stage IIB, alive, 2945 days 4835.3
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 4776.5
L838 71 years, female, stage:Stage IA, dead, 1005 days 4682.2
L710 72 years, female, stage:Stage IIA, alive, 1775 days 4681.5
L872 71 years, female, stage:Stage IA, alive, 1793 days 4673.4
L593 78 years, male, stage:Stage IA, dead, 2436 days 4633.0
L778 65 years, female, stage:Stage IA, alive, 1600 days 4591.6
L541 70 years, female, stage:Stage IIIA, dead, 915 days 4515.9
L413 72 years, female, stage:Stage IIIA, dead, 313 days 4503.5
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 4488.0
L543 65 years, male, stage:Stage IA, alive, 2711 days 4453.9
L663 62 years, female, stage:Stage IB, alive, 2018 days 4452.9
L585 70 years, female, stage:Stage IIA, dead, 402 days 4437.9
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 4404.0
L440 80 years, male, stage:Stage IIB, dead, 651 days 4370.3
L596 74 years, female, stage:Stage IA, alive, 2319 days 4352.3
L768 60 years, male, stage:Stage IIIA, dead, 472 days 4322.3
L831 62 years, female, stage:Stage IB, alive, 2152 days 4297.2
L880 75 years, female, stage:Stage IA, alive, 1767 days 4213.2
L504 65 years, female, stage:Stage IA, dead, 1295 days 3999.3
L607 59 years, male, stage:Stage IB, alive, 2572 days 3966.1
L735 75 years, female, stage:Stage IA, alive, 1830 days 3822.4
L725 64 years, female, stage:Stage IA, alive, 1830 days 3760.7
L455 52 years, female, stage:Stage IA, alive, 3315 days 3561.9
L695 68 years, female, stage:Stage IB, dead, 1762 days 3521.4
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL41 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the pTPM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (pTPM) was examined. The best expression cut-off refers the pTPM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 8966.42
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6925.1
Number of samples 489
Samples
Sample Description pTPM
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 17621.4
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 15292.3
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 15044.2
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 14753.4
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 13878.7
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 13790.8
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 13758.7
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 13640.6
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 13608.5
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 13603.5
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 13565.7
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 13549.7
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 13439.1
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 13112.1
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 12666.9
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 12547.1
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 12308.8
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 12228.5
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 12162.5
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 11960.4
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 11956.3
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 11862.5
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 11858.2
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 11826.2
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 11729.3
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 11648.5
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 11590.1
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 11399.9
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 11308.2
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 11242.9
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 11241.4
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 11206.7
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 11143.2
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 11084.7
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 11037.8
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 10997.3
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 10960.0
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 10944.4
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 10920.5
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 10910.1
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 10900.3
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 10861.9
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 10710.7
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 10510.2
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 10500.5
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 10466.1
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 10453.9
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 10417.1
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 10410.3
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 10314.2
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 10306.7
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 10266.2
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 10250.5
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 10237.2
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 10204.1
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 10156.0
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 10154.8
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 10150.9
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 10123.9
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 10104.9
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 10101.9
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 10054.3
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 9967.5
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 9945.1
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 9901.9
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 9896.8
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 9888.1
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 9866.5
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 9722.9
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 9663.5
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 9659.5
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 9639.4
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 9563.5
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 9531.2
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 9517.6
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 9464.7
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 9441.1
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 9420.3
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 9389.5
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 9365.1
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 9359.7
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 9343.2
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 9312.4
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 9289.8
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 9283.6
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 9230.5
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 9206.7
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 9118.9
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 9106.0
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 9067.2
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 9036.9
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 9022.5
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 9014.6
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 9002.6
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 8994.6
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 8988.6
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 8985.6
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 8981.7
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 8966.4
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 8929.6
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 8915.1
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 8888.6
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 8883.5
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 8869.8
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 8851.1
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 8797.1
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 8748.9
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 8709.6
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 8652.4
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 8626.7
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 8605.7
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 8592.2
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 8530.4
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 8522.8
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 8519.9
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 8505.4
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 8482.1
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 8466.8
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 8434.1
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 8430.3
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 8417.3
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 8388.1
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 8386.3
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 8384.1
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 8379.6
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 8339.9
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 8336.1
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 8322.5
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 8312.1
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 8301.6
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 8282.5
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 8281.5
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 8189.6
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 8178.8
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 8135.6
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 8135.4
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 8133.7
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 8131.2
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 8107.2
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 8070.2
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 8014.9
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 7974.3
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 7958.2
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 7933.8
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 7920.5
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 7845.9
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 7830.3
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 7821.1
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 7807.2
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 7790.4
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 7787.8
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 7733.8
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 7721.3
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 7704.7
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 7687.8
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 7686.2
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 7666.4
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 7650.7
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 7647.2
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 7646.3
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 7632.5
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 7631.0
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 7629.1
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 7594.5
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 7571.0
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 7554.7
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 7547.6
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 7538.8
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 7517.6
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 7517.0
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 7507.3
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 7494.0
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 7484.5
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 7421.4
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 7405.3
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 7402.4
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 7395.7
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 7365.6
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 7353.1
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 7325.5
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 7324.1
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 7287.4
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 7259.1
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 7258.0
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 7257.5
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 7246.6
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 7231.4
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 7230.0
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 7223.2
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 7208.5
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 7200.7
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 7198.2
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 7180.3
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 7163.1
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 7156.1
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 7153.0
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 7136.4
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 7133.8
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 7130.3
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 7126.6
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 7118.5
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 7094.4
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 7082.8
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 6985.1
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 6981.7
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 6977.5
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 6974.3
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 6971.2
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 6954.7
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 6946.3
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 6945.1
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 6931.0
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 6921.4
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 6904.3
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 6901.9
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 6901.6
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 6895.8
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 6895.1
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 6894.1
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 6889.8
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 6844.7
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 6835.8
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 6820.4
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 6807.5
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 6802.8
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 6801.5
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 6773.3
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 6762.5
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 6721.0
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 6684.6
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 6672.9
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 6669.4
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 6666.4
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 6663.1
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 6662.2
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 6658.8
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 6642.6
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 6622.7
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 6613.7
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 6612.4
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 6598.2
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 6574.5
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 6564.1
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 6546.1
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 6543.9
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 6527.4
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 6518.9
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 6517.8
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 6492.6
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 6483.0
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 6443.8
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 6441.9
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 6429.7
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 6427.6
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 6420.3
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 6418.8
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 6409.0
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 6402.7
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 6398.9
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 6397.6
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 6389.1
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 6383.5
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 6380.6
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 6357.9
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 6356.4
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 6330.9
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 6317.0
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 6315.5
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 6298.8
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 6297.5
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 6257.2
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 6238.3
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 6210.5
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 6203.6
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 6182.8
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 6181.0
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 6174.0
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 6165.6
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 6161.6
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 6140.5
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 6126.7
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 6114.2
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 6094.0
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 6090.1
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 6081.2
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 6078.1
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 6074.5
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 6056.9
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 6054.7
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 6048.1
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 6045.6
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 6041.6
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 6034.8
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 6007.7
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 5995.8
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 5992.4
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 5986.9
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 5979.0
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 5961.7
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 5956.8
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 5937.2
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 5920.6
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 5912.3
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 5899.6
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 5854.4
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 5852.8
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 5790.9
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 5789.8
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 5780.7
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 5751.4
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 5740.0
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 5714.4
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 5709.3
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 5708.0
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 5704.6
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 5700.5
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 5687.2
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 5683.9
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 5660.3
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 5652.0
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 5647.8
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 5647.0
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 5626.9
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 5579.0
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 5575.1
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 5573.7
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 5572.5
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 5559.2
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 5546.2
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 5546.1
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 5543.1
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 5537.7
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 5527.5
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 5466.9
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 5455.0
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 5447.8
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 5447.2
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 5435.5
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 5423.7
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 5422.2
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 5412.8
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 5383.2
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 5360.8
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 5356.5
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 5352.1
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 5348.2
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 5348.1
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 5317.4
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 5298.8
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 5290.5
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 5285.6
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 5284.6
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 5268.2
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 5265.6
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 5262.3
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 5261.3
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 5244.8
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 5208.3
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 5203.7
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 5186.9
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 5112.1
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 5107.0
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 5105.2
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 5095.1
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 5088.0
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 5087.8
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 5039.4
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 5036.0
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 5035.0
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 5010.9
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 4996.2
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 4980.6
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 4973.9
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 4920.1
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 4916.0
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 4840.2
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 4832.8
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 4830.9
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 4823.9
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 4816.4
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 4808.5
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 4767.4
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 4759.9
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 4759.7
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 4753.3
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 4732.1
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 4727.0
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 4725.1
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 4708.8
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 4681.0
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 4678.6
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 4669.1
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 4663.0
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 4628.1
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 4627.3
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 4626.0
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 4595.9
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 4568.6
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 4550.7
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 4543.2
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 4542.9
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 4522.6
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 4514.8
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 4501.7
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 4484.9
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 4477.1
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 4466.3
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 4457.9
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 4445.2
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 4425.8
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 4408.0
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 4391.9
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 4383.9
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 4377.4
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 4375.2
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 4330.6
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 4325.6
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 4312.4
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 4312.2
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 4299.2
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 4291.6
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 4290.5
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 4290.5
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 4277.0
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 4271.8
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 4263.9
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 4206.1
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 4205.2
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 4190.1
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 4189.8
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 4158.7
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 4134.5
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 4128.7
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 4127.7
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 4091.1
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 4075.0
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 4046.0
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 4013.8
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 4007.1
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 4006.7
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 3939.7
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 3923.9
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 3917.7
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 3909.9
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 3871.8
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 3865.7
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 3864.8
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 3857.9
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 3846.8
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 3845.9
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 3801.8
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 3783.4
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 3769.5
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 3751.6
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 3740.6
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 3730.9
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 3676.3
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 3675.6
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 3669.8
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 3635.1
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 3633.9
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 3617.7
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 3607.3
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 3595.5
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 3589.3
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 3566.9
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 3559.7
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 3495.0
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 3440.0
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 3409.3
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 3347.5
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 3345.6
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 3264.4
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 3257.0
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 3225.6
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 3153.6
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 3151.7
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 3123.2
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 3103.0
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 3047.1
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 3002.1
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 2964.5
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 2957.0
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 2871.1
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 2829.2
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 2823.3
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 2783.6
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 2745.7
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 2570.8
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

RPL41 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the pTPM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (pTPM) was examined. The best expression cut-off refers the pTPM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5606.17
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5882.7
Number of samples 68
Samples
Sample Description pTPM
L857 69 years, male, stage:Stage IB, dead, 226 days 12018.8
L466 65 years, female, stage:Stage IIIA, dead, 412 days 9757.8
L736 67 years, male, stage:Stage IA, dead, 1195 days 8636.4
L457 46 years, female, stage:Stage IIA, alive, 2901 days 8493.2
L568 77 years, female, stage:Stage IIB, dead, 71 days 8319.3
L563 61 years, female, stage:Stage IIB, dead, 1216 days 8268.2
L447 67 years, male, stage:Stage IIB, alive, 3203 days 8104.1
L818 67 years, male, stage:Stage IB, alive, 2480 days 8012.0
L608 73 years, male, stage:Stage IA, alive, 2350 days 7859.5
L539 78 years, male, stage:Stage IB, dead, 370 days 7658.3
L488 61 years, female, stage:Stage IIA, alive, 2993 days 7568.7
L852 64 years, male, stage:Stage IB, dead, 700 days 7480.7
L586 67 years, male, stage:Stage IIA, dead, 784 days 7474.7
L468 53 years, male, stage:Stage IB, alive, 3004 days 7448.7
L459 75 years, male, stage:Stage IIA, alive, 3181 days 7305.3
L420 57 years, female, stage:Stage IIB, dead, 295 days 7111.4
L881 70 years, male, stage:Stage IB, alive, 1752 days 6829.8
L592 61 years, male, stage:Stage IB, alive, 2368 days 6822.5
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 6820.1
L747 74 years, female, stage:Stage IA, dead, 1112 days 6511.9
L820 73 years, female, stage:Stage IA, alive, 2405 days 6383.1
L496 77 years, male, stage:Stage IB, alive, 2761 days 6311.9
L744 75 years, male, stage:Stage IA, alive, 1614 days 6296.9
L642 67 years, male, stage:Stage IB, dead, 1167 days 6276.2
L633 77 years, female, stage:Stage IA, alive, 2102 days 6166.5
L860 77 years, male, stage:Stage IA, alive, 2056 days 6067.4
L655 62 years, male, stage:Stage IIA, dead, 1603 days 6009.3
L490 58 years, male, stage:Stage IA, dead, 716 days 5998.1
L483 65 years, male, stage:Stage IB, dead, 77 days 5889.6
L464 66 years, male, stage:Stage IB, dead, 1935 days 5794.1
L604 67 years, male, stage:Stage IIA, dead, 286 days 5777.7
L739 49 years, female, stage:Stage IIIA, dead, 352 days 5757.1
L456 48 years, male, stage:Stage IIA, dead, 1660 days 5646.5
L753 61 years, male, stage:Stage IIA, alive, 1705 days 5565.9
L559 72 years, male, stage:Stage IIB, alive, 2615 days 5545.5
L767 67 years, male, stage:Stage IA, alive, 1718 days 5440.9
L472 71 years, male, stage:Stage IB, dead, 423 days 5414.7
L406 64 years, male, stage:Stage IA, alive, 3057 days 5410.5
L644 67 years, male, stage:Stage IA, dead, 282 days 5376.5
L650 69 years, female, stage:Stage IB, dead, 986 days 5361.1
L444 74 years, female, stage:Stage IIB, alive, 3337 days 5316.1
L864 66 years, female, stage:Stage IA, alive, 2192 days 5207.0
L886 71 years, male, stage:Stage IB, dead, 1932 days 5135.4
L442 75 years, female, stage:Stage IB, dead, 2433 days 5133.3
L854 62 years, female, stage:Stage IB, alive, 2256 days 5082.1
L755 82 years, male, stage:Stage IIA, dead, 227 days 5042.5
L723 67 years, male, stage:Stage IIA, dead, 433 days 4978.4
L529 79 years, female, stage:Stage IA, alive, 2775 days 4966.9
L685 71 years, female, stage:Stage IIB, alive, 1944 days 4950.6
L652 82 years, male, stage:Stage IA, dead, 5 days 4860.7
L788 54 years, female, stage:Stage IA, alive, 3385 days 4790.3
L824 70 years, male, stage:Stage IA, dead, 665 days 4704.1
L658 65 years, female, stage:Stage IIB, alive, 2083 days 4692.8
L856 69 years, male, stage:Stage IA, dead, 1465 days 4650.9
L715 69 years, female, stage:Stage IIIA, dead, 150 days 4635.3
L858 69 years, female, stage:Stage IIB, dead, 558 days 4634.1
L758 84 years, male, stage:Stage IA, dead, 1562 days 4626.4
L661 66 years, male, stage:Stage IA, dead, 1123 days 4585.1
L712 61 years, male, stage:Stage IA, alive, 1698 days 4459.6
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 4419.1
L534 66 years, male, stage:Stage IIA, alive, 2693 days 4200.4
L719 63 years, male, stage:Stage IB, alive, 1615 days 3997.3
L756 72 years, male, stage:Stage IB, alive, 1796 days 3749.6
L760 80 years, male, stage:Stage IIA, alive, 1895 days 3716.3
L470 78 years, female, stage:Stage IB, dead, 1774 days 3512.6
L572 58 years, male, stage:Stage IA, alive, 2532 days 3278.0
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 2902.6
L884 71 years, male, stage:Stage IIA, alive, 1627 days 2812.3
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0000920017 Tumor N/A
CPT0000930003 Normal N/A
CPT0001060010 Tumor N/A
CPT0001070003 Normal N/A
CPT0001380003 Tumor N/A
CPT0001390003 Normal N/A
CPT0001580009 Tumor N/A
CPT0001590003 Normal N/A
CPT0001660013 Tumor N/A
CPT0001690003 Normal N/A
CPT0001800013 Tumor N/A
CPT0001810003 Normal N/A
CPT0001960003 Tumor N/A
CPT0001970003 Normal N/A
CPT0008410003 Tumor N/A
CPT0008420003 Normal N/A
CPT0008450003 Tumor N/A
CPT0011710004 Tumor N/A
CPT0011750003 Normal N/A
CPT0011910004 Tumor N/A
CPT0011930003 Normal N/A
CPT0013600003 Tumor N/A
CPT0013630003 Normal N/A
CPT0013880003 Tumor N/A
CPT0013910003 Normal N/A
CPT0014260003 Tumor N/A
CPT0014290003 Normal N/A
CPT0014860003 Tumor N/A
CPT0014930003 Normal N/A
CPT0015410003 Tumor N/A
CPT0015420003 Normal N/A
CPT0021450003 Tumor N/A
CPT0021490003 Normal N/A
CPT0023310003 Tumor N/A
CPT0023320003 Normal N/A
CPT0051690004 Tumor N/A
CPT0052170004 Tumor N/A
CPT0052940004 Tumor N/A
CPT0053040004 Tumor N/A
CPT0055100004 Tumor N/A
CPT0062810003 Normal N/A
CPT0063730003 Tumor N/A
CPT0063750003 Normal N/A
CPT0063810003 Tumor N/A
CPT0063840003 Normal N/A
CPT0066780003 Tumor N/A
CPT0066810003 Normal N/A
CPT0066890003 Tumor N/A
CPT0066930003 Normal N/A
CPT0067070003 Tumor N/A
CPT0067110003 Normal N/A
CPT0067250003 Tumor N/A
CPT0067290003 Normal N/A
CPT0067450003 Tumor N/A
CPT0067470004 Normal N/A
CPT0067620003 Tumor N/A
CPT0067770003 Normal N/A
CPT0067940003 Tumor N/A
CPT0067950003 Normal N/A
CPT0068100003 Tumor N/A
CPT0068130003 Normal N/A
CPT0068610003 Tumor N/A
CPT0068650003 Normal N/A
CPT0068800003 Tumor N/A
CPT0068830003 Normal N/A
CPT0069360003 Tumor N/A
CPT0069370003 Normal N/A
CPT0069520003 Tumor N/A
CPT0069550003 Normal N/A
CPT0069700003 Tumor N/A
CPT0069720003 Normal N/A
CPT0070060003 Tumor N/A
CPT0070080003 Normal N/A
CPT0079830003 Tumor N/A
CPT0079850003 Normal N/A
CPT0082740004 Tumor N/A
CPT0082770003 Normal N/A
CPT0082850004 Tumor N/A
CPT0082890003 Normal N/A
CPT0083100003 Tumor N/A
CPT0083140003 Normal N/A
CPT0083390004 Tumor N/A
CPT0083420003 Normal N/A
CPT0083780003 Tumor N/A
CPT0083810003 Normal N/A
CPT0084140003 Tumor N/A
CPT0084170003 Normal N/A
CPT0086310003 Tumor N/A
CPT0086320003 Normal N/A
CPT0086750003 Tumor N/A
CPT0086770003 Normal N/A
CPT0089340003 Tumor N/A
CPT0089360003 Normal N/A
CPT0090170004 Tumor N/A
CPT0090200003 Normal N/A
CPT0090340003 Tumor N/A
CPT0090370003 Normal N/A
CPT0090570004 Tumor N/A
CPT0090600003 Normal N/A
CPT0090700003 Tumor N/A
CPT0090720003 Normal N/A
CPT0090860003 Tumor N/A
CPT0090900004 Normal N/A
CPT0091240003 Tumor N/A
CPT0091260003 Normal N/A
CPT0091860003 Tumor N/A
CPT0091870003 Normal N/A
CPT0092240003 Tumor N/A
CPT0092250003 Normal N/A
CPT0092530003 Tumor N/A
CPT0092930003 Tumor N/A
CPT0092940003 Normal N/A
CPT0097580003 Tumor N/A
CPT0097600003 Normal N/A
CPT0098130003 Tumor N/A
CPT0102450003 Tumor N/A
CPT0102480003 Normal N/A
CPT0104630003 Tumor N/A
CPT0104650003 Normal N/A
CPT0104750003 Tumor N/A
CPT0104760003 Normal N/A
CPT0104970003 Tumor N/A
CPT0105010004 Normal N/A
CPT0105060003 Tumor N/A
CPT0105190003 Normal N/A
CPT0105230003 Tumor N/A
CPT0105250003 Normal N/A
CPT0105270003 Tumor N/A
CPT0105330003 Tumor N/A
CPT0105370004 Normal N/A
CPT0105510003 Tumor N/A
CPT0105550003 Normal N/A
CPT0105600003 Tumor N/A
CPT0105610003 Normal N/A
CPT0105630003 Tumor N/A
CPT0105680003 Normal N/A
CPT0105710003 Tumor N/A
CPT0105740003 Normal N/A
CPT0105940003 Tumor N/A
CPT0105980003 Normal N/A
CPT0106100003 Normal N/A
CPT0106110003 Tumor N/A
CPT0109680004 Tumor N/A
CPT0109700003 Normal N/A
CPT0109710003 Normal N/A
CPT0109720004 Tumor N/A
CPT0109740004 Tumor N/A
CPT0109760003 Normal N/A
CPT0109830004 Tumor N/A
CPT0109850003 Normal N/A
CPT0110860004 Tumor N/A
CPT0110890003 Normal N/A
CPT0110980004 Tumor N/A
CPT0111300003 Tumor N/A
CPT0111480003 Normal N/A
CPT0111590003 Normal N/A
CPT0112060003 Tumor N/A
CPT0112080003 Normal N/A
CPT0113210003 Tumor N/A
CPT0113220003 Normal N/A
CPT0113990003 Tumor N/A
CPT0114010003 Normal N/A
CPT0114660004 Tumor N/A
CPT0114690003 Normal N/A
CPT0114840003 Tumor N/A
CPT0114880003 Normal N/A
CPT0115070003 Tumor N/A
CPT0115090003 Normal N/A
CPT0117970003 Tumor N/A
CPT0118010003 Normal N/A
CPT0118160003 Tumor N/A
CPT0118180003 Normal N/A
CPT0118200003 Tumor N/A
CPT0118240003 Normal N/A
CPT0118340003 Tumor N/A
CPT0118360003 Normal N/A
CPT0118570003 Tumor N/A
CPT0118600003 Normal N/A
CPT0118620003 Tumor N/A
CPT0118650003 Normal N/A
CPT0118810003 Tumor N/A
CPT0118830003 Normal N/A
CPT0118880003 Tumor N/A
CPT0118890003 Normal N/A
CPT0125810003 Tumor N/A
CPT0125830003 Normal N/A
CPT0146580004 Tumor N/A
CPT0146600003 Normal N/A
CPT0146680004 Tumor N/A
CPT0146700003 Normal N/A
CPT0146780004 Tumor N/A
CPT0146800003 Normal N/A
CPT0146880004 Tumor N/A
CPT0146980004 Tumor N/A
CPT0147000003 Normal N/A
CPT0147080004 Tumor N/A
CPT0147100003 Normal N/A
CPT0147380004 Tumor N/A
CPT0147400003 Normal N/A
CPT0147480004 Tumor N/A
CPT0147500003 Normal N/A
CPT0147580004 Tumor N/A
CPT0147600003 Normal N/A
CPT0147880004 Tumor N/A
CPT0147900003 Normal N/A
CPT0147980004 Tumor N/A
CPT0148000003 Normal N/A
CPT0148080004 Tumor N/A
CPT0148100003 Normal N/A
CPT0148180004 Tumor N/A
CPT0148200003 Normal N/A
CPT0148280004 Tumor N/A
CPT0148300003 Normal N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0209510003 Normal N/A
CPT0001030003 Normal N/A
CPT0123370003 Normal N/A
CPT0175560003 Tumor N/A
CPT0218280003 Tumor N/A
CPT0126470003 Normal N/A
CPT0112660003 Normal N/A
CPT0237550004 Tumor N/A
CPT0245790003 Normal N/A
CPT0007740003 Tumor N/A
CPT0102840003 Normal N/A
CPT0233640003 Normal N/A
CPT0238130003 Normal N/A
CPT0221650003 Tumor N/A
CPT0083980003 Tumor N/A
CPT0130410003 Tumor N/A
CPT0112580003 Tumor N/A
CPT0241170003 Tumor N/A
CPT0086260003 Tumor N/A
CPT0064050003 Normal N/A
CPT0233330003 Normal N/A
CPT0079110003 Normal N/A
CPT0126400003 Normal N/A
CPT0104930003 Tumor N/A
CPT0105430003 Normal N/A
CPT0237200004 Tumor N/A
CPT0146400003 Normal N/A
CPT0063440003 Normal N/A
CPT0108560003 Tumor N/A
CPT0221220003 Normal N/A
CPT0079060003 Normal N/A
CPT0126830003 Normal N/A
CPT0208770003 Tumor N/A
CPT0232670003 Tumor N/A
CPT0222730003 Tumor N/A
CPT0209040003 Normal N/A
CPT0234930004 Tumor N/A
CPT0090440003 Tumor N/A
CPT0104380003 Normal N/A
CPT0202740003 Normal N/A
CPT0204600003 Tumor N/A
CPT0237080003 Normal N/A
CPT0183250004 Tumor N/A
CPT0175410003 Normal N/A
CPT0098770003 Tumor N/A
CPT0196810003 Tumor N/A
CPT0112540003 Tumor N/A
CPT0023470003 Tumor N/A
CPT0202530004 Tumor N/A
CPT0117770003 Normal N/A
CPT0245840003 Normal N/A
CPT0233600003 Tumor N/A
CPT0192540004 Tumor N/A
CPT0126740003 Tumor N/A
CPT0223820003 Normal N/A
CPT0197150003 Tumor N/A
CPT0227020003 Tumor N/A
CPT0197090003 Tumor N/A
CPT0197170003 Normal N/A
CPT0130440004 Normal N/A
CPT0146380004 Tumor N/A
CPT0245780003 Tumor N/A
CPT0091610003 Tumor N/A
CPT0175390003 Tumor N/A
CPT0010050003 Tumor N/A
CPT0136640003 Tumor N/A
CPT0111150004 Tumor N/A
CPT0234560003 Tumor N/A
CPT0204820003 Normal N/A
CPT0197860003 Normal N/A
CPT0098800003 Normal N/A
CPT0237990003 Normal N/A
CPT0068280003 Tumor N/A
CPT0108600003 Normal N/A
CPT0175160003 Normal N/A
CPT0091090003 Normal N/A
CPT0186180003 Tumor N/A
CPT0208780003 Normal N/A
CPT0105420003 Tumor N/A
CPT0079100003 Tumor N/A
CPT0225470003 Normal N/A
CPT0101130003 Tumor N/A
CPT0186210003 Normal N/A
CPT0079050003 Tumor N/A
CPT0233160003 Normal N/A
CPT0063430003 Tumor N/A
CPT0086270003 Normal N/A
CPT0089880003 Tumor N/A
CPT0219360003 Tumor N/A
CPT0202580004 Normal N/A
CPT0204660003 Normal N/A
CPT0146480004 Tumor N/A
CPT0237780003 Normal N/A
CPT0223790003 Tumor N/A
CPT0128890003 Tumor N/A
CPT0197380003 Normal N/A
CPT0069900003 Normal N/A
CPT0091820003 Tumor N/A
CPT0197480003 Tumor N/A
CPT0222740003 Normal N/A
CPT0126670003 Tumor N/A
CPT0146500003 Normal N/A
CPT0202220004 Normal N/A
CPT0175270003 Normal N/A
CPT0233120003 Tumor N/A
CPT0217420003 Tumor N/A
CPT0063480003 Tumor N/A
CPT0196820003 Normal N/A
CPT0091050003 Tumor N/A
CPT0126390003 Tumor N/A
CPT0186140003 Normal N/A
CPT0115860003 Normal N/A
CPT0007760003 Normal N/A
CPT0175120003 Tumor N/A
CPT0237410004 Tumor N/A
CPT0010060003 Normal N/A
CPT0232690003 Normal N/A
CPT0147180004 Tumor N/A
CPT0130270003 Tumor N/A
CPT0191750003 Normal N/A
CPT0238110004 Tumor N/A
CPT0183270003 Normal N/A
CPT0087210003 Normal N/A
CPT0237570003 Normal N/A
CPT0126450003 Tumor N/A
CPT0023500003 Normal N/A
CPT0104950003 Normal N/A
CPT0126810003 Tumor N/A
CPT0221200003 Tumor N/A
CPT0063500003 Normal N/A
CPT0197520003 Normal N/A
CPT0245890003 Normal N/A
CPT0128900003 Normal N/A
CPT0227400003 Tumor N/A
CPT0130070003 Normal N/A
CPT0209020004 Tumor N/A
CPT0069890003 Tumor N/A
CPT0191710003 Tumor N/A
CPT0117720003 Tumor N/A
CPT0126530003 Tumor N/A
CPT0190550003 Tumor N/A
CPT0123350003 Tumor N/A
CPT0091620003 Normal N/A
CPT0195510003 Tumor N/A
CPT0126760003 Normal N/A
CPT0197210003 Tumor N/A
CPT0130310003 Normal N/A
CPT0175260003 Tumor N/A
CPT0112600003 Normal N/A
CPT0218310003 Normal N/A
CPT0202040003 Normal N/A
CPT0234820003 Normal N/A
CPT0130030003 Tumor N/A
CPT0186130003 Tumor N/A
CPT0225380003 Tumor N/A
CPT0111000004 Normal N/A
CPT0202400004 Normal N/A
CPT0191860003 Tumor N/A
CPT0234950004 Normal N/A
CPT0001020003 Tumor N/A
CPT0237060004 Tumor N/A
CPT0202720003 Tumor N/A
CPT0209490003 Tumor N/A
CPT0104360003 Tumor N/A
CPT0187370003 Tumor N/A
CPT0112730003 Normal N/A
CPT0112650003 Tumor N/A
CPT0115830003 Tumor N/A
CPT0202350004 Tumor N/A
CPT0204990003 Tumor N/A
CPT0237210003 Normal N/A
CPT0204800003 Tumor N/A
CPT0202170003 Tumor N/A
CPT0205000003 Normal N/A
CPT0245880003 Tumor N/A
CPT0207210003 Tumor N/A
CPT0236420003 Tumor N/A
CPT0233320003 Tumor N/A
CPT0064040003 Tumor N/A
CPT0197100003 Normal N/A
CPT0207250003 Normal N/A
CPT0234580003 Normal N/A
CPT0227070003 Normal N/A
CPT0241210003 Normal N/A
CPT0087190003 Tumor N/A
CPT0147200003 Normal N/A
CPT0083990003 Normal N/A
CPT0192590004 Normal N/A
CPT0221660003 Normal N/A
CPT0237760003 Tumor N/A
CPT0202020008 Tumor N/A
CPT0237430003 Normal N/A
CPT0219390003 Normal N/A
CPT0068320003 Normal N/A
CPT0195520003 Normal N/A
CPT0187380003 Normal N/A
CPT0227420003 Normal N/A
CPT0102790003 Tumor N/A
CPT0197740003 Tumor N/A
CPT0237690004 Tumor N/A
CPT0245830003 Tumor N/A
CPT0147700003 Normal N/A
CPT0236430003 Normal N/A
CPT0191930003 Normal N/A
CPT0147680004 Tumor N/A
CPT0217490003 Normal N/A
CPT0112550003 Normal N/A
CPT0136660003 Normal N/A
CPT0237710003 Normal N/A
CPT0112720003 Tumor N/A
CPT0234790003 Tumor N/A
CPT0237970004 Tumor N/A
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts


Antibody HPA053169
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS

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