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  • MCRIP1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:132.5 nTPM
HPA Brain:66.4 nTPM
GTEx:132.5 nTPM
Pig:71.1 nTPM
Mouse:105.7 nTPM
Allen mouse:1.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

66.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 54.5
1961 Female, age 42, unknown 55.7
2226 Male, age 75, left hemisphere 53.2
Dorsomedial nucleus
nTPM: 60.6
1989 Male, age 62, unknown 64.3
2041 Female, age 72, unknown 58.7
2017 Female, age 42, unknown 58.6
Lateral hypothalamic area
nTPM: 63.0
1791 Male, age 80, right hemisphere 66.8
2412 Male, age 62, unknown 66.3
2228 Male, age 66, unknown 59.9
2271 Male, age 75, both hemispheres 59.2
Mammillary body
nTPM: 66.4
1923 Female, age 72, unknown 73.5
1834 Female, age 42, unknown 70.3
2413 Male, age 66, unknown 66.3
1945 Male, age 80, right hemisphere 61.6
1948 Female, age 72, unknown 60.4
Paraventricular nucleus
nTPM: 56.6
2700 Male, age 62, unknown 56.6
Preoptic area
nTPM: 57.0
1861 Female, age 42, unknown 59.2
1907 Male, age 80, right hemisphere 58.9
2414 Female, age 72, unknown 52.8
Supraoptic nucleus
nTPM: 58.1
2835 Female, age 72, unknown 63.3
2043 Male, age 62, unknown 61.5
1894 Female, age 72, unknown 49.4
Ventromedial nucleus
nTPM: 53.0
1982 Female, age 72, unknown 56.1
1822 Female, age 42, unknown 49.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.5
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 132.5
Samples: 257

Max nTPM: 304.1
Min nTPM: 52.2
Std nTPM: 35.2
Median nTPM: 126.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 304.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 270.0
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 268.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 232.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 231.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 221.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 216.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 215.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 214.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 203.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 201.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 200.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 194.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 188.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 186.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 185.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 185.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 184.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 183.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 181.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 181.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 181.1
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 180.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 180.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 178.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 178.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 177.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 177.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 177.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 177.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 176.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 173.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 172.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 171.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 171.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 170.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 169.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 168.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 167.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 166.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 164.2
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 164.2
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 164.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 162.3
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 162.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 161.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 159.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 158.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 158.9
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 158.5
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 158.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 155.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 154.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 154.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 154.4
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 154.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 154.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 153.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 153.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 152.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 150.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 150.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 149.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 148.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 148.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 148.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 147.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 147.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 146.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 145.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 145.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 145.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 144.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 144.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 143.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 143.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 143.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 143.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 142.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 142.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 142.2
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 141.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 140.9
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 139.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 139.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 138.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 138.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 138.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 137.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 137.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 136.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 136.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 136.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 135.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 134.9
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 134.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 134.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 134.4
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 134.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 134.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 133.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 133.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 133.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 133.3
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 133.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 133.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 132.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 132.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 132.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 132.6
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 132.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 132.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 132.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 131.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 131.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 131.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 130.6
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 130.3
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 129.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 129.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 129.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 129.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 128.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 128.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 128.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 127.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 127.0
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 126.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 126.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 126.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 125.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 125.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 124.7
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 124.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 124.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 124.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 124.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 124.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 123.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 123.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 121.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 121.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 121.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 120.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 119.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 119.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 119.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 119.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 119.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 119.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 119.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 118.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 118.7
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 118.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 118.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 118.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 118.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 118.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 118.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 117.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 116.8
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 116.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 116.5
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 115.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 115.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 115.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 115.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 115.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 115.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 115.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 115.3
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 114.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 114.7
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 114.6
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 114.4
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 114.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 114.0
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 113.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 113.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 113.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 113.4
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 113.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 113.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 112.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 111.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 111.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 111.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 111.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 110.6
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 110.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 109.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 109.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 108.9
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 108.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 108.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 108.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 107.7
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 107.5
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 107.4
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 106.9
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 106.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 106.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 106.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 106.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 105.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 105.0
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 104.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 104.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 104.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 104.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 103.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 103.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 103.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 103.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 103.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 103.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 103.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 102.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 102.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 102.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 102.1
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 101.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 101.1
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 101.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 100.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 100.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 100.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 99.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 99.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 98.9
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 98.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 98.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 98.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 98.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 97.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 97.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 96.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 95.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 95.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 93.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 93.3
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 90.7
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 90.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 90.3
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 89.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 88.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 88.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 84.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 83.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 81.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 79.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 75.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 72.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 63.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 63.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 53.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 52.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.1
Pig sample Sample description nTPM
Hypothalamus
nTPM: 71.1
Samples: 4

Max nTPM: 92.5
Min nTPM: 53.2
Sample A Female 92.5
Sample B Female 76.1
Sample C Male 62.7
Sample D Male 53.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.7
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 105.8
Samples: 4

Max nTPM: 116.6
Min nTPM: 100.2
Sample A Male 103.7
Sample B Male 116.6
Sample C Female 100.2
Sample D Female 102.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.8
69528100 Antisense, RP_050421_03_B03, Mouse strain C57BL/6J (56 days, male) 1.8

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