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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
194.0
nTPM
FANTOM5:
370.7
Scaled Tags Per Million
Pig:
123.3
nTPM
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
194.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 168.9
2301
Female, age 85, both hemispheres
220.5
2090
Male, age 80, both hemispheres
164.1
1984
Male, age 76, both hemispheres
158.7
2188
Female, age 91, both hemispheres
132.6
Dorsal cochlear nucleus nTPM: 194.0
2802
Male, age 74, right hemisphere
221.2
2370
Male, age 61, both hemispheres
219.2
2378
Male, age 80, both hemispheres
207.9
2187
Female, age 91, both hemispheres
161.7
2058
Male, age 76, both hemispheres
160.0
Dorsal tegmental nucleus nTPM: 172.1
2083
Male, age 80, both hemispheres
187.7
2358
Male, age 61, both hemispheres
187.2
1936
Male, age 76, left hemisphere
159.5
2326
Male, age 74, both hemispheres
154.1
Dorsolateral tegmental area nTPM: 160.7
2337
Male, age 61, both hemispheres
185.9
2654
Male, age 80, both hemispheres
174.0
2141
Male, age 76, both hemispheres
154.6
2751
Female, age 85, both hemispheres
153.9
2360
Male, age 74, both hemispheres
135.0
Kolliker-Fuse nucleus nTPM: 151.8
2315
Male, age 76, right hemisphere
163.4
2163
Male, age 80, both hemispheres
152.7
2793
Female, age 91, left hemisphere
139.2
Lateral lemniscal nuclei nTPM: 124.1
2169
Male, age 76, both hemispheres
143.0
2746
Female, age 85, left hemisphere
139.9
2320
Female, age 91, left hemisphere
116.2
2453
Male, age 74, right hemisphere
115.1
2036
Male, age 80, both hemispheres
106.2
Lateral parabrachial nucleus nTPM: 181.1
2790
Male, age 61, both hemispheres
215.6
2792
Male, age 76, both hemispheres
192.4
2139
Female, age 85, right hemisphere
170.6
2013
Male, age 80, both hemispheres
145.9
Lateral vestibular nucleus nTPM: 189.9
2311
Male, age 80, both hemispheres
201.0
2184
Male, age 76, both hemispheres
178.8
Locus coeruleus nTPM: 147.9
2317
Female, age 72, unknown
172.4
1980
Male, age 76, both hemispheres
160.0
2014
Male, age 55, unknown
152.8
2123
Female, age 91, both hemispheres
145.1
2788
Male, age 74, unknown
139.3
2162
Male, age 80, both hemispheres
136.8
2720
Male, age 74, both hemispheres
128.7
Medial parabrachial nucleus nTPM: 176.2
2156
Male, age 61, both hemispheres
213.1
2786
Male, age 76, both hemispheres
188.9
2170
Female, age 91, both hemispheres
178.5
2463
Female, age 85, right hemisphere
153.9
2854
Male, age 80, both hemispheres
146.6
Medial periolivary nuclei nTPM: 127.1
2081
Male, age 80, both hemispheres
138.7
2063
Male, age 76, both hemispheres
132.0
2791
Male, age 74, right hemisphere
123.4
2171
Female, age 85, both hemispheres
120.8
2458
Female, age 91, both hemispheres
120.4
Motor facial nucleus nTPM: 130.3
2126
Male, age 61, both hemispheres
162.1
2795
Female, age 91, both hemispheres
143.0
2062
Male, age 76, both hemispheres
133.4
2697
Female, age 85, both hemispheres
122.0
2365
Male, age 74, right hemisphere
118.5
2327
Male, age 80, both hemispheres
102.6
Motor trigeminal nucleus nTPM: 142.5
2309
Male, age 76, both hemispheres
170.2
2335
Male, age 61, both hemispheres
160.8
2321
Female, age 91, both hemispheres
137.9
2560
Male, age 74, both hemispheres
133.2
2079
Male, age 80, both hemispheres
110.3
Nuclei of the trapezoid body nTPM: 122.9
1983
Male, age 76, both hemispheres
143.3
2166
Male, age 80, both hemispheres
132.4
2368
Female, age 91, both hemispheres
124.1
2735
Female, age 85, both hemispheres
113.8
2159
Male, age 61, both hemispheres
100.9
Nucleus raphe magnus nTPM: 121.8
2051
Male, age 76, both hemispheres
196.3
2328
Male, age 80, both hemispheres
132.7
2455
Male, age 74, both hemispheres
123.4
2459
Female, age 91, both hemispheres
101.0
2160
Male, age 61, both hemispheres
92.7
2172
Female, age 85, both hemispheres
84.8
Paramedian reticular nucleus nTPM: 145.0
2052
Male, age 76, both hemispheres
153.3
2313
Male, age 61, both hemispheres
153.0
2057
Male, age 80, both hemispheres
152.7
2050
Female, age 85, both hemispheres
121.0
Pedunculopontine tegmental nucleus nTPM: 150.8
2338
Male, age 61, both hemispheres
152.3
2334
Male, age 80, both hemispheres
150.7
1921
Female, age 85, both hemispheres
149.3
Pontine nuclei nTPM: 125.8
1968
Male, age 76, left hemisphere
179.1
2115
Male, age 80, left hemisphere
145.6
1863
Male, age 55, unknown
140.8
2109
Female, age 72, unknown
133.3
2319
Female, age 91, both hemispheres
123.8
2787
Female, age 85, both hemispheres
115.7
2454
Male, age 74, left hemisphere
88.2
2727
Male, age 61, right hemisphere
80.3
Pontine raphe nucleus nTPM: 130.6
2853
Male, age 76, midline
159.2
2122
Female, age 85, midline
101.9
Posteroventral cochlear nucleus nTPM: 162.3
2371
Male, age 61, both hemispheres
211.0
2341
Male, age 80, both hemispheres
179.7
2070
Male, age 76, both hemispheres
171.8
2135
Female, age 91, both hemispheres
134.4
2752
Female, age 85, both hemispheres
114.5
Principal sensory trigeminal nucleus nTPM: 126.8
2324
Male, age 76, both hemispheres
188.7
2367
Female, age 91, left hemisphere
110.9
2158
Male, age 61, both hemispheres
109.1
2008
Male, age 80, left hemisphere
98.6
Reticular pontine nucleus, caudal nTPM: 135.5
2092
Male, age 76, both hemispheres
176.0
2457
Female, age 91, both hemispheres
130.5
2559
Male, age 74, both hemispheres
125.0
2332
Male, age 80, right hemisphere
110.5
Reticular pontine nucleus, oral nTPM: 134.2
2167
Male, age 76, both hemispheres
176.9
1939
Male, age 80, both hemispheres
161.5
2012
Female, age 85, both hemispheres
121.9
2366
Female, age 91, both hemispheres
113.2
2361
Male, age 74, both hemispheres
97.5
Reticulotegmental nucleus nTPM: 148.6
2333
Male, age 80, both hemispheres
165.2
2322
Female, age 91, both hemispheres
148.0
2452
Male, age 74, both hemispheres
146.3
2325
Male, age 76, both hemispheres
134.9
Spinal trigeminal nucleus, oral nTPM: 157.5
1978
Male, age 76, both hemispheres
173.1
2164
Male, age 80, both hemispheres
159.1
2737
Female, age 85, both hemispheres
140.3
Subcoeruleus area nTPM: 146.8
2451
Male, age 74, both hemispheres
158.4
2369
Female, age 85, left hemisphere
157.8
2089
Male, age 76, left hemisphere
150.3
2323
Female, age 91, left hemisphere
134.8
1958
Male, age 80, both hemispheres
132.7
Superior olive nTPM: 131.6
2020
Male, age 76, both hemispheres
163.6
2329
Male, age 80, right hemisphere
139.7
2364
Male, age 74, right hemisphere
129.3
2561
Female, age 91, both hemispheres
122.2
1875
Female, age 85, both hemispheres
103.3
Ventral periolivary nuclei nTPM: 134.5
2023
Male, age 76, both hemispheres
165.9
2130
Female, age 85, both hemispheres
150.3
2165
Male, age 80, both hemispheres
125.4
2794
Female, age 91, left hemisphere
96.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 146.5
2359
Male, age 61, both hemispheres
170.5
1959
Male, age 76, both hemispheres
159.6
2840
Female, age 85, both hemispheres
151.0
2161
Male, age 80, both hemispheres
140.7
2456
Female, age 91, both hemispheres
136.8
2449
Male, age 74, both hemispheres
120.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.