COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: Medium
Peripheral nerve/ganglion: Medium
RNA expressioni
Consensus:2.5 nTPM
HPA:2.0 nTPM
GTEx:2.5 nTPM
FANTOM5:17.4 Scaled Tags Per Million
COLON - SINGLE CELL RNA EXPRESSION
Neuroendocrine cellsTuft cellsColonocytesGoblet cellsT-cellsNK-cellsEnteric transient amplifying cellsEnteric stem cells020406080100120140nCPM

COLON - Antibody stainingi
Antibody HPA028255
Endothelial cells Low
Glandular cells Medium
Peripheral nerve/ganglion Medium



COLON - HPA RNA-seqi
Average nTPMi 2.0
overview
Male, age 54
Colon sample 67
nTPM: 2.2
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57
Colon sample 68
nTPM: 2.7
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80
Colon sample 69
nTPM: 1.9
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68
Colon sample 70
nTPM: 1.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68
Colon sample 76
nTPM: 2.2
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61
Colon sample 299
nTPM: 1.6
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80
Colon sample 300
nTPM: 1.7
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78
Colon sample 368
nTPM: 1.6
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84
Colon sample 381
nTPM: 2.2
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80
Colon sample 384
nTPM: 1.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78
Colon sample 389
nTPM: 2.3
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69
Colon sample 391
nTPM: 2.2
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72
Colon sample 403
nTPM: 1.5
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Max subtype nTPMi 2.5
GTEx sample id Sample description nTPM
1.82.43.20.44.80.00.51.01.52.02.53.03.54.04.55.0
Colon - Sigmoid
Average nTPM: 2.5
Samples: 419

Max nTPM: 5.4
Min nTPM: 0.4
Std nTPM: 0.9
Median nTPM: 2.4
GTEX-1J8Q3-2426-SM-CL53S 60-69 years, male 5.4
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 4.8
GTEX-1LGOU-1726-SM-D3L8P 20-29 years, female 4.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 4.5
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 4.4
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 4.4
GTEX-17KNJ-1826-SM-7LT9N 50-59 years, male 4.4
GTEX-183FY-1426-SM-7DHLM 20-29 years, male 4.4
GTEX-1IDJU-1926-SM-CL53W 60-69 years, female 4.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 4.3
GTEX-17HHE-1626-SM-7DHLN 50-59 years, male 4.3
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1.41.72.20.23.40.00.51.01.52.02.53.03.54.04.5
Colon - Transverse
Average nTPM: 1.8
Samples: 479

Max nTPM: 4.6
Min nTPM: 0.2
Std nTPM: 0.7
Median nTPM: 1.7
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 4.6
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 4.6
GTEX-1S82U-0726-SM-E9TKI 30-39 years, female 4.5
GTEX-1GZ4H-1226-SM-9KNUA 50-59 years, female 4.4
GTEX-WY7C-1626-SM-4ONC8 50-59 years, male 4.1
GTEX-15CHC-1626-SM-5ZZWS 60-69 years, female 4.0
GTEX-1IDJF-1826-SM-CKZOE 20-29 years, male 4.0
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 4.0
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 3.9
GTEX-1LBAC-1626-SM-CXZKV 20-29 years, male 3.9
GTEX-14H4A-1926-SM-5ZZWN 40-49 years, female 3.8
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COLON - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 17.4
FF:10014-101C5 62,83,84 years, mixed 17.4

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