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  • TISSUE

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  • FIS1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:197.3 nTPM
HPA Brain:127.7 nTPM
GTEx:197.3 nTPM
Pig:236.8 nTPM
Mouse:319.5 nTPM
Allen mouse:6.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 86.7
2226 Male, age 75, left hemisphere 91.1
1961 Female, age 42, unknown 82.2
Dorsomedial nucleus
nTPM: 87.5
1989 Male, age 62, unknown 92.0
2017 Female, age 42, unknown 88.3
2041 Female, age 72, unknown 82.3
Lateral hypothalamic area
nTPM: 106.0
1791 Male, age 80, right hemisphere 122.6
2228 Male, age 66, unknown 117.0
2271 Male, age 75, both hemispheres 108.4
2412 Male, age 62, unknown 76.1
Mammillary body
nTPM: 127.7
1948 Female, age 72, unknown 143.9
1923 Female, age 72, unknown 136.2
1945 Male, age 80, right hemisphere 134.3
1834 Female, age 42, unknown 120.1
2413 Male, age 66, unknown 104.1
Paraventricular nucleus
nTPM: 120.6
2700 Male, age 62, unknown 120.6
Preoptic area
nTPM: 95.2
2414 Female, age 72, unknown 112.0
1861 Female, age 42, unknown 93.5
1907 Male, age 80, right hemisphere 80.2
Supraoptic nucleus
nTPM: 113.6
2043 Male, age 62, unknown 131.5
1894 Female, age 72, unknown 111.1
2835 Female, age 72, unknown 98.2
Ventromedial nucleus
nTPM: 74.8
1982 Female, age 72, unknown 82.4
1822 Female, age 42, unknown 67.1

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

197.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 197.3
Samples: 257

Max nTPM: 573.8
Min nTPM: 67.7
Std nTPM: 69.9
Median nTPM: 174.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 573.8
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 490.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 430.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 413.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 411.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 410.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 396.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 357.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 355.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 350.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 348.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 346.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 344.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 343.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 341.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 329.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 325.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 318.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 318.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 317.0
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 315.5
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 311.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 309.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 304.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 302.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 288.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 287.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 286.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 281.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 280.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 279.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 278.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 272.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 271.2
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 269.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 268.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 265.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 263.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 262.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 253.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 253.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 252.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 250.2
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 248.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 248.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 245.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 242.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 239.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 238.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 236.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 235.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 233.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 231.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 231.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 230.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 230.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 229.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 229.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 229.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 227.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 226.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 222.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 222.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 221.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 217.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 216.6
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 216.5
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 214.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 214.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 214.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 213.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 212.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 212.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 211.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 211.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 211.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 210.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 209.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 208.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 207.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 206.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 206.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 205.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 205.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 204.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 203.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 203.1
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 202.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 201.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 200.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 199.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 198.4
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 198.2
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 198.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 197.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 195.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 194.8
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 194.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 193.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 193.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 191.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 191.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 190.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 189.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 189.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 187.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 187.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 187.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 186.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 185.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 185.4
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 184.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 184.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 184.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 183.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 181.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 179.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 178.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 178.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 178.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 178.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 178.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 177.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 177.3
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 177.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 176.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 175.7
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 175.7
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 174.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 174.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 174.0
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 173.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 173.6
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 172.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 172.0
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 171.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 171.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 171.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 171.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 171.2
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 171.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 170.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 170.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 170.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 170.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 170.1
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 169.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 169.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 168.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 168.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 167.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 167.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 167.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 167.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 166.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 166.3
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 166.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 165.8
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 165.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 164.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 164.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 164.4
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 163.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 163.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 163.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 162.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 162.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 162.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 162.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 161.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 161.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 161.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 160.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 160.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 160.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 160.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 158.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 158.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 158.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 157.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 156.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 155.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 155.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 155.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 155.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 154.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 154.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 153.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 152.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 152.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 152.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 152.1
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 152.1
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 151.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 151.1
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 150.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 150.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 150.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 149.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 149.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 149.2
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 149.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 148.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 148.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 148.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 148.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 147.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 147.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 146.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 146.1
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 146.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 145.8
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 144.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 144.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 144.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 144.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 144.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 143.4
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 142.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 142.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 142.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 142.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 142.3
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 141.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 141.4
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 141.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 141.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 140.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 139.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 139.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 139.0
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 138.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 137.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 136.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 135.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 135.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 133.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 133.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 132.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 132.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 132.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 129.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 129.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 128.8
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 128.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 126.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 121.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 121.7
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 121.0
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 118.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 118.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 116.1
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 110.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 96.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 93.0
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 73.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 67.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

236.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 236.8
Samples: 4

Max nTPM: 312.2
Min nTPM: 165.6
Sample A Female 312.2
Sample B Female 239.3
Sample C Male 230.1
Sample D Male 165.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

319.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 319.5
Samples: 4

Max nTPM: 363.6
Min nTPM: 302.4
Sample A Male 305.0
Sample B Male 363.6
Sample C Female 302.4
Sample D Female 307.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.1
686210 Antisense, RP_040916_01_B06, Mouse strain C57BL/6J (56 days, male) 6.1

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