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  • SUMMARY

  • TISSUE

  • BRAIN

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  • GDI1
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:368.3 nTPM
HPA Brain:471.8 nTPM
GTEx:368.3 nTPM
Pig:480.5 nTPM
Mouse:496.6 nTPM
Allen mouse:21.8 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

471.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 467.6
2226 Male, age 75, left hemisphere 556.8
1961 Female, age 42, unknown 378.5
Dorsomedial nucleus
nTPM: 386.6
1989 Male, age 62, unknown 411.9
2041 Female, age 72, unknown 405.0
2017 Female, age 42, unknown 342.9
Lateral hypothalamic area
nTPM: 471.8
2228 Male, age 66, unknown 551.3
2271 Male, age 75, both hemispheres 512.5
1791 Male, age 80, right hemisphere 483.7
2412 Male, age 62, unknown 339.9
Mammillary body
nTPM: 388.9
1923 Female, age 72, unknown 483.3
2413 Male, age 66, unknown 381.4
1948 Female, age 72, unknown 367.5
1945 Male, age 80, right hemisphere 361.5
1834 Female, age 42, unknown 351.0
Paraventricular nucleus
nTPM: 451.0
2700 Male, age 62, unknown 451.0
Preoptic area
nTPM: 398.6
1907 Male, age 80, right hemisphere 458.7
1861 Female, age 42, unknown 370.9
2414 Female, age 72, unknown 366.1
Supraoptic nucleus
nTPM: 381.8
2835 Female, age 72, unknown 390.0
2043 Male, age 62, unknown 387.2
1894 Female, age 72, unknown 368.3
Ventromedial nucleus
nTPM: 421.3
1982 Female, age 72, unknown 445.7
1822 Female, age 42, unknown 396.9

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

368.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 368.3
Samples: 257

Max nTPM: 549.8
Min nTPM: 212.5
Std nTPM: 71.2
Median nTPM: 371.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 549.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 543.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 537.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 519.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 502.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 500.2
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 499.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 498.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 496.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 495.9
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 492.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 489.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 481.0
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 480.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 478.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 469.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 468.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 467.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 464.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 464.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 462.5
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 461.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 461.0
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 457.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 457.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 455.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 455.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 455.4
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 455.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 454.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 454.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 453.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 453.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 451.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 451.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 451.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 449.1
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 448.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 448.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 448.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 445.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 443.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 443.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 441.4
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 440.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 440.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 438.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 438.0
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 436.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 436.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 435.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 435.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 435.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 431.7
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 431.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 430.0
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 429.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 429.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 429.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 427.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 425.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 425.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 425.6
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 424.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 422.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 421.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 421.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 418.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 417.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 417.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 417.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 416.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 416.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 415.7
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 415.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 415.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 414.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 413.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 412.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 411.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 411.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 409.6
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 409.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 408.1
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 406.7
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 406.1
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 405.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 403.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 403.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 403.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 403.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 400.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 399.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 399.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 399.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 399.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 398.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 396.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 395.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 394.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 391.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 391.9
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 391.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 388.6
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 388.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 387.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 386.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 386.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 385.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 385.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 384.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 384.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 383.5
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 383.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 383.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 383.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 380.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 378.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 378.0
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 377.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 376.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 376.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 376.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 374.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 373.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 373.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 373.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 372.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 371.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 371.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 370.2
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 369.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 367.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 366.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 365.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 364.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 363.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 361.8
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 360.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 360.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 359.9
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 359.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 358.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 358.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 357.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 357.3
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 356.5
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 356.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 354.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 353.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 351.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 351.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 350.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 349.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 348.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 346.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 345.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 344.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 344.2
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 342.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 340.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 339.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 339.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 338.5
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 336.5
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 336.1
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 336.0
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 335.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 329.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 329.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 327.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 324.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 324.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 324.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 323.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 323.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 322.9
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 322.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 320.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 320.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 320.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 319.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 318.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 318.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 317.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 316.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 316.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 315.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 315.4
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 314.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 314.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 313.7
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 313.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 311.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 311.5
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 309.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 306.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 305.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 304.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 303.7
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 301.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 301.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 300.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 298.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 298.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 297.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 297.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 297.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 297.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 297.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 296.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 295.8
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 295.6
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 294.1
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 292.7
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 292.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 291.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 290.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 290.0
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 290.0
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 288.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 288.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 281.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 280.1
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 279.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 278.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 278.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 278.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 275.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 275.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 274.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 269.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 269.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 267.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 267.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 263.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 263.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 261.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 260.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 260.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 260.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 260.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 256.4
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 255.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 255.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 254.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 249.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 247.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 246.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 246.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 243.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 236.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 232.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 231.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 229.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 228.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 212.5
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

480.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 480.5
Samples: 4

Max nTPM: 597.6
Min nTPM: 426.4
Sample A Female 597.6
Sample B Female 440.9
Sample C Male 457.1
Sample D Male 426.4

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

496.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 496.7
Samples: 4

Max nTPM: 530.9
Min nTPM: 461.9
Sample A Male 481.5
Sample B Male 530.9
Sample C Female 512.3
Sample D Female 461.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.8
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 21.8
74357589 Antisense, RP_060117_01_A05, Mouse strain C57BL/6J (56 days, male) 21.8

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