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  • SUMMARY

  • TISSUE

  • BRAIN

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  • MBP
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

141.917
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:15745.8 nTPM
HPA Brain:15859.4 nTPM
GTEx:15745.8 nTPM
Pig:6931.8 nTPM
Mouse:2728.5 nTPM
Allen mouse:14.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA049222
Hypothalamus mean intensity 141.917
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 75.412
Mammillary nucleus 61.022
Periventricular hypothalamic nucleus 134.305
Supraoptic nucleus 141.917
Tuberal nucleus 83.219
Ventral tuberomammillary nucleus 136.243
Lateral preoptic area 55.423
Medial preoptic area 60.697
Suprachiasmatic nucleus 96.830
Paraventricular hypothalamic nucleus 140.998
Anterior hypothalamic area, central 122.940
Ventral medial hypothalamic nucleus 110.133
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 121.746
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 92.997
Dorsal medial hypothalamic nucleus 124.820
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15859.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1249.6
2226 Male, age 75, left hemisphere 1545.8
1961 Female, age 42, unknown 953.5
Dorsomedial nucleus
nTPM: 4717.5
2017 Female, age 42, unknown 8771.1
1989 Male, age 62, unknown 4242.8
2041 Female, age 72, unknown 1138.6
Lateral hypothalamic area
nTPM: 7276.7
2412 Male, age 62, unknown 9274.8
2271 Male, age 75, both hemispheres 8170.3
2228 Male, age 66, unknown 7454.5
1791 Male, age 80, right hemisphere 4207.3
Mammillary body
nTPM: 12841.6
1948 Female, age 72, unknown 16884.7
1945 Male, age 80, right hemisphere 16452.0
1834 Female, age 42, unknown 15800.1
2413 Male, age 66, unknown 7895.1
1923 Female, age 72, unknown 7176.3
Paraventricular nucleus
nTPM: 15859.4
2700 Male, age 62, unknown 15859.4
Preoptic area
nTPM: 8890.6
2414 Female, age 72, unknown 15869.9
1861 Female, age 42, unknown 9552.8
1907 Male, age 80, right hemisphere 1249.0
Supraoptic nucleus
nTPM: 8251.4
2043 Male, age 62, unknown 12048.6
2835 Female, age 72, unknown 6971.5
1894 Female, age 72, unknown 5734.2
Ventromedial nucleus
nTPM: 1019.9
1982 Female, age 72, unknown 1146.5
1822 Female, age 42, unknown 893.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15745.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 15745.8
Samples: 257

Max nTPM: 165159.8
Min nTPM: 114.2
Std nTPM: 22958.9
Median nTPM: 8528.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 165159.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 164791.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 118764.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 117413.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 115394.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 104230.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 91389.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 74883.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 73244.5
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 54957.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 52282.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 51919.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 51498.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 50910.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 50426.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 50050.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 47506.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 47255.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 46040.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 42209.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 41300.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 39736.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 37236.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 36129.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 35700.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 35633.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 35361.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 34344.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 33664.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 32773.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 30706.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 30305.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 29968.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 29936.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 29383.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 28962.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 28786.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 28763.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 27836.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 27749.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 27226.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 26560.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 25560.8
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 25162.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 24725.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 24300.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 23911.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 23520.2
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 23476.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 23252.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 22907.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 22002.0
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 21060.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 20893.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 20581.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 19600.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 19272.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 19087.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 18838.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 18659.1
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 18224.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 18204.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 18133.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 18056.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 17851.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 17667.5
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 16996.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 16777.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 16777.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 16522.7
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 16498.0
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 16483.5
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 16181.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 16160.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 16152.2
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 15125.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 15071.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 14949.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 14768.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 14670.3
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 14350.6
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 14342.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 14288.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 14050.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 13842.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 13604.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 13479.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 13190.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 13189.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 12952.3
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 12896.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 12866.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 12821.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 12707.4
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 12604.2
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 12039.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 11903.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 11874.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 11857.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 11713.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 11697.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 11586.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 11311.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 11022.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 10940.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 10705.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 10647.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 10510.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 10500.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 10398.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 10393.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 10387.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 10200.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 9903.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 9788.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 9638.2
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 9583.4
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 9488.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 9452.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 9367.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 9345.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 9300.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 9150.7
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 9030.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 8697.1
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 8683.0
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 8647.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 8617.8
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 8528.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 8241.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 8012.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 7964.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 7941.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 7756.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 7690.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 7529.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 7479.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 7427.4
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 7266.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 7079.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 7047.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 6945.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 6802.9
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 6694.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 6531.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 6393.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 6321.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 6097.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 5998.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 5896.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 5830.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 5769.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 5754.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5687.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 5647.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 5580.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 5505.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 5488.8
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 5387.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 5276.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 5269.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 5265.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 5224.9
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 5211.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 5211.0
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 5087.4
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 5026.5
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 5019.9
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 4974.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 4963.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 4872.0
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 4697.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 4642.7
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 4628.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 4610.7
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 4571.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 4530.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 4466.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 4395.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 4390.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 4347.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 4340.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 4282.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 4118.9
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 4090.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 4063.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 4023.2
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 3956.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 3919.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 3905.1
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 3848.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 3824.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 3812.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 3762.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 3746.1
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 3718.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 3673.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 3585.2
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 3539.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 3490.1
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 3361.9
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 3356.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 3298.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 3119.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 3104.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 3036.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 2963.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 2919.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 2826.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 2818.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 2772.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 2737.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 2700.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 2693.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 2655.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 2610.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 2609.0
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 2564.1
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 2537.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 2491.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 2440.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 2362.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 2316.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 2304.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2279.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 2216.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 2169.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 2156.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 2110.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 1969.9
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 1960.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 1952.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1886.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 1833.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 1774.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 1725.7
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1535.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1405.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1404.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1381.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 1340.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 1302.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1265.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 1263.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1160.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 1141.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 1136.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1123.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1111.4
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1061.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 913.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 759.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 757.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 531.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 353.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 229.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 114.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6931.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6931.8
Samples: 4

Max nTPM: 9418.2
Min nTPM: 2495.0
Sample A Female 7279.4
Sample B Female 8534.7
Sample C Male 9418.2
Sample D Male 2495.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2728.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2728.5
Samples: 4

Max nTPM: 3298.5
Min nTPM: 2116.4
Sample A Male 2116.4
Sample B Male 2465.0
Sample C Female 3034.0
Sample D Female 3298.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.9
112202838 Antisense, RP_110421_01_F01, Mouse strain C57BL/6J (56 days, male) 19.3
79632288 Antisense, RP_071204_01_C03, Mouse strain C57BL/6J (56 days, male) 10.5

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