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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
10.7
nTPM
HPA Brain:
26.8
nTPM
GTEx:
10.7
nTPM
FANTOM5:
29.6
Scaled Tags Per Million
Pig:
3.7
nTPM
Mouse:
29.1
nTPM
Allen mouse:
4.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
26.8
Sample id
Sample description
nTPM
Amygdala nTPM: 23.2
2514
Male, age 75, right hemisphere
55.3
1987
Female, age 91, left hemisphere
35.2
2517
Female, age 94, left hemisphere
15.3
2814
Male, age 76, right hemisphere
6.0
2695
Female, age 67, right hemisphere
4.4
Basal amygdala nTPM: 17.9
2609
Male, age 75, right hemisphere
49.1
2243
Female, age 91, right hemisphere
20.2
2827
Female, age 67, right hemisphere
13.4
2110
Male, age 80, left hemisphere
9.7
2685
Female, age 94, left hemisphere
7.9
1955
Male, age 76, both hemispheres
6.9
Central amygdala nTPM: 17.5
2515
Male, age 75, right hemisphere
36.6
2701
Female, age 91, right hemisphere
17.4
2239
Male, age 80, left hemisphere
16.8
2826
Female, age 94, left hemisphere
10.7
1905
Male, age 76, both hemispheres
5.8
Corticomedial amygdala nTPM: 26.8
2428
Male, age 75, right hemisphere
59.1
2242
Female, age 91, right hemisphere
50.3
2829
Male, age 80, left hemisphere
16.7
2535
Female, age 67, right hemisphere
15.0
2429
Female, age 94, left hemisphere
13.7
2240
Male, age 76, both hemispheres
6.0
Lateral amygdala nTPM: 22.4
2516
Male, age 75, right hemisphere
51.0
2256
Male, age 80, left hemisphere
23.4
2255
Female, age 91, right hemisphere
22.8
2830
Female, age 67, right hemisphere
17.0
2534
Female, age 94, left hemisphere
12.9
1883
Male, age 76, both hemispheres
7.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
10.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 10.7
Samples: 152
Max nTPM: 40.4
Min nTPM: 0.2
Std nTPM: 8.4
Median nTPM: 8.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
40.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
39.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
38.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
34.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
32.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
28.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
26.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
26.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
24.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
23.8
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
23.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
23.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
22.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
22.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
22.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
21.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
21.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
20.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
20.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
20.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
20.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
20.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
20.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
20.0
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
19.9
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
19.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
19.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
19.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
19.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
19.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
18.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
18.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
16.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
16.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
16.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
15.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
15.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
15.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
15.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
14.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
14.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
14.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
13.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
13.8
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
13.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
12.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
12.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
12.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
12.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
12.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
12.1
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
11.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
11.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
11.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
11.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
11.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
11.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
11.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
11.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
10.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
10.5
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
10.4
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
10.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
10.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
10.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
10.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
10.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
10.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
9.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
9.8
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
9.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
9.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
9.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
9.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
9.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
8.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
8.7
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
8.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
8.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
8.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
8.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
7.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
7.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
7.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
7.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
7.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
7.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
7.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
7.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
7.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
6.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
6.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
6.6
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
6.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
6.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
6.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
6.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
6.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
5.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
5.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
5.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
5.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
5.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
5.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
5.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
5.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
5.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
4.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
4.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
4.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
4.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
4.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
4.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
4.1
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
4.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
3.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
3.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
3.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
3.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
3.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
3.8
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
3.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
3.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
3.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
2.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
2.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
2.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
2.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
2.7
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
2.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
2.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
2.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
2.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
2.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
2.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
2.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
1.7
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
1.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
1.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
1.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
1.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
1.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
1.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
1.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
1.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
0.8
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
0.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
0.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
0.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
0.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
0.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
29.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 29.1
Samples: 4
Max nTPM: 35.2
Min nTPM: 18.2
Sample A
Male
35.2
Sample B
Male
30.3
Sample C
Female
32.7
Sample D
Female
18.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
