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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
644.8
nTPM
GTEx:
644.8
nTPM
FANTOM5:
688.6
Scaled Tags Per Million
Pig:
263.1
nTPM
Mouse:
1632.1
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
644.8
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 644.8
Samples: 105
Max nTPM: 1106.4
Min nTPM: 473.0
Std nTPM: 105.7
Median nTPM:
237_1
82 years, male
1106.4
218_1
71 years, female
985.8
375_1
74 years, female
940.4
347_1
72 years, male
922.4
490_1
67 years, female
861.8
35_1
74 years, female
831.9
307_1
66 years, female
811.9
415_1
77 years, female
780.0
386_1
76 years, male
779.8
229_1
69 years, female
775.7
379_1
60 years, male
764.1
243_1
75 years, male
758.5
389_1
86 years, female
757.7
447_1
81 years, male
755.2
246_1
77 years, male
739.6
172_1
72 years, female
730.7
316_1
62 years, male
729.0
313_1
79 years, female
727.7
311_1
78 years, male
719.4
321_1
62 years, female
717.7
319_1
81 years, male
712.0
217_1
76 years, male
704.9
265_1
87 years, male
697.1
352_1
62 years, male
693.7
324_1
76 years, male
690.8
173_1
67 years, male
690.3
126_1
63 years, male
687.4
414_1
84 years, female
685.1
466_1
57 years, female
680.7
355_1
70 years, female
680.6
42_1
85 years, male
680.4
322_1
76 years, male
679.9
396_1
62 years, male
677.5
384_1
83 years, male
675.2
468_1
89 years, male
672.6
377_1
82 years, female
671.2
137_1
83 years, male
670.1
526_1
61 years, male
667.6
354_1
81 years, female
662.4
266_1
85 years, male
662.0
495_1
57 years, female
658.9
117_1
61 years, male
657.5
335_1
73 years, female
654.2
6_1
73 years, female
654.1
349_1
83 years, male
651.9
189_1
76 years, male
649.1
518_1
75 years, female
648.5
99_1
64 years, male
645.4
350_1
84 years, female
643.0
499_1
55 years, female
642.7
315_1
62 years, female
633.4
425_1
59 years, female
627.1
376_1
75 years, female
626.6
405_1
91 years, male
623.9
394_1
75 years, female
623.5
142_1
61 years, female
618.1
43_1
64 years, female
616.3
317_1
60 years, male
612.6
491_1
89 years, female
609.8
348_1
84 years, male
609.6
177_1
74 years, male
609.3
480_1
63 years, male
608.5
286_1
68 years, female
604.2
293_1
68 years, female
603.7
292_1
71 years, male
602.7
145_1
84 years, male
601.7
318_1
68 years, male
595.8
163_1
78 years, male
592.7
406_1
79 years, male
591.5
17_1
71 years, male
591.3
353_1
82 years, female
589.8
291_1
76 years, male
584.2
251_1
78 years, male
583.3
320_1
89 years, female
583.1
503_1
68 years, male
580.9
314_1
67 years, male
578.1
308_1
70 years, female
577.8
81_1
67 years, male
575.3
162_1
79 years, female
574.6
413_1
59 years, female
572.9
288_1
66 years, female
571.3
4_1
88 years, female
567.5
264_1
73 years, female
563.4
115_1
83 years, male
562.5
119_1
70 years, female
560.5
120_1
70 years, female
560.5
2_1
77 years, female
555.2
295_1
61 years, female
554.0
452_1
88 years, female
551.3
254_1
77 years, female
547.2
506_1
65 years, male
540.1
351_1
91 years, male
539.9
153_1
70 years, female
537.6
139_1
64 years, female
537.4
404_1
82 years, female
536.4
32_1
67 years, male
529.3
356_1
87 years, female
524.9
18_1
88 years, male
519.2
517_1
88 years, male
516.9
501_1
88 years, male
516.0
89_1
63 years, male
509.5
9_1
66 years, female
508.0
41_1
94 years, female
501.3
109_1
81 years, female
478.6
149_1
88 years, male
473.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.