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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
67.0
nTPM
HPA Brain:
54.9
nTPM
GTEx:
67.0
nTPM
FANTOM5:
107.0
Scaled Tags Per Million
Pig:
30.2
nTPM
Mouse:
36.4
nTPM
Allen mouse:
9.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.9
Sample id
Sample description
nTPM
Amygdala nTPM: 54.9
2514
Male, age 75, right hemisphere
63.6
2814
Male, age 76, right hemisphere
59.5
2695
Female, age 67, right hemisphere
54.3
1987
Female, age 91, left hemisphere
50.1
2517
Female, age 94, left hemisphere
46.9
Basal amygdala nTPM: 53.0
2609
Male, age 75, right hemisphere
61.5
2685
Female, age 94, left hemisphere
56.0
1955
Male, age 76, both hemispheres
53.5
2243
Female, age 91, right hemisphere
53.2
2110
Male, age 80, left hemisphere
51.4
2827
Female, age 67, right hemisphere
42.3
Central amygdala nTPM: 51.4
2701
Female, age 91, right hemisphere
53.9
1905
Male, age 76, both hemispheres
52.5
2515
Male, age 75, right hemisphere
51.6
2239
Male, age 80, left hemisphere
51.0
2826
Female, age 94, left hemisphere
48.2
Corticomedial amygdala nTPM: 52.4
2240
Male, age 76, both hemispheres
61.3
2428
Male, age 75, right hemisphere
57.6
2829
Male, age 80, left hemisphere
52.3
2242
Female, age 91, right hemisphere
51.4
2429
Female, age 94, left hemisphere
49.3
2535
Female, age 67, right hemisphere
42.5
Lateral amygdala nTPM: 48.7
2516
Male, age 75, right hemisphere
57.0
1883
Male, age 76, both hemispheres
53.5
2255
Female, age 91, right hemisphere
50.3
2534
Female, age 94, left hemisphere
47.6
2256
Male, age 80, left hemisphere
45.6
2830
Female, age 67, right hemisphere
38.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
67.0
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 67.0
Samples: 152
Max nTPM: 137.4
Min nTPM: 32.6
Std nTPM: 17.4
Median nTPM: 66.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
137.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
125.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
120.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
115.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
110.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
107.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
94.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
94.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
93.8
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
91.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
90.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
90.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
89.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
88.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
88.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
87.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
87.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
87.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
84.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
83.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
83.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
82.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
82.8
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
82.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
81.5
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
81.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
80.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
80.4
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
80.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
80.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
79.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
79.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
78.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
78.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
78.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
78.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
77.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
77.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
77.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
77.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
76.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
75.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
75.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
75.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
74.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
74.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
74.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
74.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
74.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
72.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
72.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
72.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
72.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
72.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
71.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
71.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
71.3
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
71.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
70.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
69.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
69.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
68.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
68.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
68.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
68.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
68.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
68.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
67.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
67.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
67.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
67.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
67.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
66.8
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
66.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
66.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
66.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
64.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
64.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
63.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
63.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
63.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
62.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
62.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
62.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
61.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
61.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
60.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
60.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
60.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
60.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
60.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
60.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
59.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
59.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
59.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
59.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
59.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
59.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
58.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
58.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
58.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
58.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
58.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
57.4
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
55.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
55.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
55.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
55.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
55.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
55.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
55.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
55.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
54.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
54.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
54.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
53.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
53.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
53.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
53.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
53.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
52.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
52.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
52.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
51.6
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
51.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
51.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
51.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
50.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
50.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
50.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
49.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
49.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
48.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
48.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
47.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
46.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
46.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
45.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
45.7
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
45.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
45.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
43.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
43.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
43.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
42.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
38.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
36.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
36.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
33.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
32.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.4
Mouse sample
Sample description
nTPM
Amygdala nTPM: 36.5
Samples: 4
Max nTPM: 37.4
Min nTPM: 34.9
Sample A
Male
37.3
Sample B
Male
34.9
Sample C
Female
36.2
Sample D
Female
37.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.