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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
391.3
nTPM
GTEx:
391.3
nTPM
FANTOM5:
174.1
Scaled Tags Per Million
Pig:
40.5
nTPM
Mouse:
76.4
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
391.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 391.3
Samples: 105
Max nTPM: 583.6
Min nTPM: 251.2
Std nTPM: 60.1
Median nTPM:
35_1
74 years, female
583.6
218_1
71 years, female
569.8
384_1
83 years, male
542.0
452_1
88 years, female
537.8
379_1
60 years, male
526.6
237_1
82 years, male
510.6
120_1
70 years, female
500.5
153_1
70 years, female
493.5
396_1
62 years, male
478.9
394_1
75 years, female
478.7
375_1
74 years, female
476.1
377_1
82 years, female
453.4
347_1
72 years, male
451.0
308_1
70 years, female
448.2
145_1
84 years, male
446.1
137_1
83 years, male
445.6
99_1
64 years, male
444.2
315_1
62 years, female
437.4
526_1
61 years, male
436.1
376_1
75 years, female
432.8
491_1
89 years, female
431.1
506_1
65 years, male
427.9
355_1
70 years, female
424.8
6_1
73 years, female
422.1
322_1
76 years, male
420.8
350_1
84 years, female
419.3
320_1
89 years, female
419.2
447_1
81 years, male
419.0
4_1
88 years, female
414.8
352_1
62 years, male
413.4
389_1
86 years, female
412.4
17_1
71 years, male
411.7
349_1
83 years, male
409.4
246_1
77 years, male
406.4
353_1
82 years, female
406.2
466_1
57 years, female
404.6
126_1
63 years, male
404.0
495_1
57 years, female
404.0
415_1
77 years, female
401.8
354_1
81 years, female
399.3
142_1
61 years, female
398.8
243_1
75 years, male
397.7
351_1
91 years, male
397.3
319_1
81 years, male
397.2
163_1
78 years, male
396.3
501_1
88 years, male
395.4
41_1
94 years, female
395.1
405_1
91 years, male
394.2
348_1
84 years, male
394.1
321_1
62 years, female
392.4
177_1
74 years, male
390.7
139_1
64 years, female
387.9
173_1
67 years, male
386.9
217_1
76 years, male
386.9
162_1
79 years, female
383.7
117_1
61 years, male
383.1
386_1
76 years, male
381.9
251_1
78 years, male
379.4
119_1
70 years, female
377.6
264_1
73 years, female
377.1
115_1
83 years, male
376.7
109_1
81 years, female
376.6
356_1
87 years, female
375.2
172_1
72 years, female
374.7
414_1
84 years, female
374.5
518_1
75 years, female
374.3
317_1
60 years, male
374.0
307_1
66 years, female
373.5
189_1
76 years, male
371.5
291_1
76 years, male
367.1
18_1
88 years, male
366.3
413_1
59 years, female
366.0
254_1
77 years, female
363.2
32_1
67 years, male
358.8
89_1
63 years, male
356.8
2_1
77 years, female
356.7
265_1
87 years, male
351.0
229_1
69 years, female
350.8
490_1
67 years, female
350.2
42_1
85 years, male
349.7
503_1
68 years, male
347.4
468_1
89 years, male
346.9
314_1
67 years, male
346.6
43_1
64 years, female
342.7
311_1
78 years, male
341.6
335_1
73 years, female
340.8
517_1
88 years, male
339.6
288_1
66 years, female
339.4
81_1
67 years, male
336.5
286_1
68 years, female
335.9
324_1
76 years, male
327.7
406_1
79 years, male
322.0
295_1
61 years, female
320.0
404_1
82 years, female
319.8
266_1
85 years, male
319.6
318_1
68 years, male
317.0
480_1
63 years, male
315.4
9_1
66 years, female
313.6
292_1
71 years, male
306.9
313_1
79 years, female
300.9
425_1
59 years, female
298.3
316_1
62 years, male
297.6
149_1
88 years, male
297.1
499_1
55 years, female
297.0
293_1
68 years, female
251.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.