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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
415.2
nTPM
HPA Brain:
208.4
nTPM
GTEx:
415.2
nTPM
FANTOM5:
197.2
Scaled Tags Per Million
Pig:
68.4
nTPM
Mouse:
73.2
nTPM
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
208.4
Sample id
Sample description
nTPM
Amygdala nTPM: 208.4
2695
Female, age 67, right hemisphere
255.6
2514
Male, age 75, right hemisphere
239.6
2517
Female, age 94, left hemisphere
183.8
1987
Female, age 91, left hemisphere
182.0
2814
Male, age 76, right hemisphere
180.7
Basal amygdala nTPM: 167.2
2827
Female, age 67, right hemisphere
203.4
2609
Male, age 75, right hemisphere
196.4
2110
Male, age 80, left hemisphere
182.8
2685
Female, age 94, left hemisphere
169.2
1955
Male, age 76, both hemispheres
135.3
2243
Female, age 91, right hemisphere
115.8
Central amygdala nTPM: 198.4
2826
Female, age 94, left hemisphere
314.5
2515
Male, age 75, right hemisphere
211.1
1905
Male, age 76, both hemispheres
191.5
2701
Female, age 91, right hemisphere
139.1
2239
Male, age 80, left hemisphere
135.9
Corticomedial amygdala nTPM: 157.6
2428
Male, age 75, right hemisphere
198.2
2829
Male, age 80, left hemisphere
191.0
2429
Female, age 94, left hemisphere
167.8
2240
Male, age 76, both hemispheres
134.5
2535
Female, age 67, right hemisphere
128.0
2242
Female, age 91, right hemisphere
126.1
Lateral amygdala nTPM: 184.8
2516
Male, age 75, right hemisphere
254.8
2830
Female, age 67, right hemisphere
252.6
2534
Female, age 94, left hemisphere
198.8
1883
Male, age 76, both hemispheres
151.5
2256
Male, age 80, left hemisphere
128.1
2255
Female, age 91, right hemisphere
122.9
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
415.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 415.2
Samples: 152
Max nTPM: 1426.5
Min nTPM: 160.1
Std nTPM: 177.9
Median nTPM: 375.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1426.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
1343.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
1011.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
909.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
848.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
825.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
705.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
700.7
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
681.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
679.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
669.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
626.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
608.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
603.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
602.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
595.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
593.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
575.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
563.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
550.6
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
542.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
542.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
540.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
533.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
530.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
529.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
510.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
503.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
502.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
500.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
498.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
493.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
490.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
485.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
479.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
474.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
470.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
470.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
460.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
458.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
456.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
454.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
453.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
452.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
448.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
448.0
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
443.8
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
439.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
439.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
436.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
431.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
427.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
425.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
424.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
422.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
422.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
419.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
414.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
407.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
404.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
401.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
400.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
398.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
397.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
395.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
391.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
391.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
388.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
387.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
385.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
384.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
384.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
382.9
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
382.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
378.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
377.7
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
373.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
370.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
370.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
369.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
367.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
367.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
365.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
364.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
364.4
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
364.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
361.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
359.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
358.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
358.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
357.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
355.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
354.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
350.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
343.9
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
343.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
342.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
340.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
340.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
340.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
335.1
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
331.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
330.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
327.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
327.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
323.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
321.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
318.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
315.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
315.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
314.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
314.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
314.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
312.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
310.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
309.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
305.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
304.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
303.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
298.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
296.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
292.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
291.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
288.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
287.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
283.0
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
282.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
278.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
277.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
275.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
272.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
268.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
268.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
266.8
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
266.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
262.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
261.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
260.3
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
259.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
257.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
252.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
247.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
246.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
246.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
243.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
240.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
240.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
231.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
208.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
186.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
161.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
160.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.