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BCAP31
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  • SUMMARY

  • TISSUE

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  • BCAP31
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

98.682
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:170.0 nTPM
HPA Brain:158.8 nTPM
GTEx:170.0 nTPM
Pig:199.8 nTPM
Mouse:168.3 nTPM
Allen mouse:5.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA003906
Hypothalamus mean intensity 98.682
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 45.547
Mammillary nucleus -
Periventricular hypothalamic nucleus 89.907
Supraoptic nucleus -
Tuberal nucleus 40.515
Ventral tuberomammillary nucleus 33.989
Lateral preoptic area 16.621
Medial preoptic area 28.497
Suprachiasmatic nucleus 98.682
Paraventricular hypothalamic nucleus -
Anterior hypothalamic area, central 36.292
Ventral medial hypothalamic nucleus 26.820
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 44.493
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 34.925
Dorsal medial hypothalamic nucleus 26.421
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

158.8
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 132.5
2226 Male, age 75, left hemisphere 162.8
1961 Female, age 42, unknown 102.2
Dorsomedial nucleus
nTPM: 113.4
1989 Male, age 62, unknown 136.6
2041 Female, age 72, unknown 115.3
2017 Female, age 42, unknown 88.2
Lateral hypothalamic area
nTPM: 158.8
2271 Male, age 75, both hemispheres 187.6
1791 Male, age 80, right hemisphere 179.1
2228 Male, age 66, unknown 145.5
2412 Male, age 62, unknown 122.9
Mammillary body
nTPM: 123.1
2413 Male, age 66, unknown 148.4
1923 Female, age 72, unknown 137.9
1945 Male, age 80, right hemisphere 119.6
1948 Female, age 72, unknown 108.2
1834 Female, age 42, unknown 101.5
Paraventricular nucleus
nTPM: 107.7
2700 Male, age 62, unknown 107.7
Preoptic area
nTPM: 106.3
1907 Male, age 80, right hemisphere 108.3
2414 Female, age 72, unknown 106.7
1861 Female, age 42, unknown 103.8
Supraoptic nucleus
nTPM: 142.9
2835 Female, age 72, unknown 169.7
1894 Female, age 72, unknown 136.4
2043 Male, age 62, unknown 122.6
Ventromedial nucleus
nTPM: 110.2
1982 Female, age 72, unknown 110.5
1822 Female, age 42, unknown 109.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

170.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 170.0
Samples: 257

Max nTPM: 351.6
Min nTPM: 89.2
Std nTPM: 36.0
Median nTPM: 163.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 351.6
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 280.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 270.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 269.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 269.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 262.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 262.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 254.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 249.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 245.4
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 245.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 242.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 242.2
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 239.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 235.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 235.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 231.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 231.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 227.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 227.6
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 226.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 223.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 222.0
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 221.9
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 221.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 216.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 216.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 215.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 212.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 211.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 209.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 209.5
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 209.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 209.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 208.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 208.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 205.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 204.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 202.9
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 202.8
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 202.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 202.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 202.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 201.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 201.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 199.2
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 199.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 199.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 198.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 198.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 198.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 198.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 196.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 196.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 195.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 195.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 194.8
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 193.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 193.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 193.0
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 192.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 192.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 190.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 190.1
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 189.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 189.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 188.3
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 186.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 186.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 186.6
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 186.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 186.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 185.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 185.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 184.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 184.2
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 184.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 183.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 183.2
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 181.2
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 179.8
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 178.7
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 178.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 178.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 177.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 176.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 176.4
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 176.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 176.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 176.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 176.0
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 175.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 175.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 174.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 174.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 174.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 174.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 173.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 173.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 173.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 173.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 172.9
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 171.9
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 170.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 170.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 169.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 169.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 168.9
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 168.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 168.8
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 168.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 168.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 168.4
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 168.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 168.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 168.1
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 167.7
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 167.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 166.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 166.5
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 166.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 165.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 164.7
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 164.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 164.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 164.3
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 164.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 163.6
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 163.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 162.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 162.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 161.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 161.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 161.0
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 160.4
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 160.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 160.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 159.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 159.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 159.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 159.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 158.7
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 158.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 158.6
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 158.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 158.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 158.0
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 156.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 156.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 156.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 156.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 155.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 155.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 155.0
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 155.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 154.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 154.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 153.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 153.4
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 153.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 153.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 153.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 153.2
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 152.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 152.8
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 152.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 152.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 152.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 151.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 151.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 151.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 151.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 151.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 150.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 150.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 150.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 149.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 149.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 148.7
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 148.6
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 148.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 148.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 147.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 147.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 146.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 146.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 146.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 146.2
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 146.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 145.4
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 145.4
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 145.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 145.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 144.9
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 144.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 144.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 143.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 142.5
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 141.5
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 141.2
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 141.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 140.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 140.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 140.6
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 140.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 140.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 140.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 139.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 139.5
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 139.1
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 139.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 139.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 138.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 138.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 138.5
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 138.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 137.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 137.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 137.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 137.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 136.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 136.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 136.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 136.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 135.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 135.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 135.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 134.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 134.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 132.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 132.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 131.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 131.0
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 130.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 130.2
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 130.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 129.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 129.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 129.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 128.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 128.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 127.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 127.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 126.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 125.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 123.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 122.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 121.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 121.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 121.2
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 119.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 115.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 113.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 110.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 109.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 106.9
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 89.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

199.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 199.9
Samples: 4

Max nTPM: 253.8
Min nTPM: 148.7
Sample A Female 253.8
Sample B Female 199.5
Sample C Male 197.4
Sample D Male 148.7

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 168.3
Samples: 4

Max nTPM: 177.3
Min nTPM: 152.0
Sample A Male 152.0
Sample B Male 177.3
Sample C Female 173.1
Sample D Female 170.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 5.5
79544798 Antisense, RP_071018_01_C08, Mouse strain C57BL/6J (56 days, male) 5.5

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