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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
36.3
nTPM
HPA Brain:
105.0
nTPM
GTEx:
36.3
nTPM
FANTOM5:
161.1
Scaled Tags Per Million
Pig:
64.1
nTPM
Mouse:
303.6
nTPM
Allen mouse:
22.9
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
105.0
Sample id
Sample description
nTPM
Amygdala nTPM: 64.6
2517
Female, age 94, left hemisphere
97.1
1987
Female, age 91, left hemisphere
95.5
2814
Male, age 76, right hemisphere
69.1
2514
Male, age 75, right hemisphere
32.3
2695
Female, age 67, right hemisphere
29.2
Basal amygdala nTPM: 81.8
2243
Female, age 91, right hemisphere
157.1
2110
Male, age 80, left hemisphere
95.3
2685
Female, age 94, left hemisphere
95.3
1955
Male, age 76, both hemispheres
90.6
2827
Female, age 67, right hemisphere
26.7
2609
Male, age 75, right hemisphere
25.6
Central amygdala nTPM: 58.7
2239
Male, age 80, left hemisphere
115.7
1905
Male, age 76, both hemispheres
62.7
2701
Female, age 91, right hemisphere
43.0
2826
Female, age 94, left hemisphere
39.0
2515
Male, age 75, right hemisphere
33.1
Corticomedial amygdala nTPM: 105.0
2242
Female, age 91, right hemisphere
149.9
2429
Female, age 94, left hemisphere
137.8
2829
Male, age 80, left hemisphere
122.7
2240
Male, age 76, both hemispheres
101.4
2535
Female, age 67, right hemisphere
88.4
2428
Male, age 75, right hemisphere
29.9
Lateral amygdala nTPM: 46.5
1883
Male, age 76, both hemispheres
68.8
2256
Male, age 80, left hemisphere
59.4
2534
Female, age 94, left hemisphere
59.0
2255
Female, age 91, right hemisphere
57.2
2830
Female, age 67, right hemisphere
18.0
2516
Male, age 75, right hemisphere
16.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
36.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 36.3
Samples: 152
Max nTPM: 134.5
Min nTPM: 1.0
Std nTPM: 25.7
Median nTPM: 31.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
134.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
133.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
116.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
111.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
107.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
95.6
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
92.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
84.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
82.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
81.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
79.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
78.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
75.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
74.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
72.6
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
71.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
70.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
69.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
69.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
68.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
68.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
66.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
63.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
63.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
55.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
54.8
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
53.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
53.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
51.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
49.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
48.7
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
48.0
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
47.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
46.9
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
46.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
45.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
45.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
44.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
44.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
44.6
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
44.4
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
42.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
42.5
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
42.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
42.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
41.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
41.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
40.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
40.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
39.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
39.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
39.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
39.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
39.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
38.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
38.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
37.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
35.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
35.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
35.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
35.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
35.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
34.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
34.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
34.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
33.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
33.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
33.4
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
33.2
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
33.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
32.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
31.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
31.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
31.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
29.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
29.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
29.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
29.2
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
28.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
28.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
27.2
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
27.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
26.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
26.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
26.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
26.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
26.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
25.3
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
25.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
25.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
24.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
24.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
23.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
23.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
23.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
22.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
22.4
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
22.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
21.5
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
21.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
21.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
21.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
20.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
20.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
20.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
19.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
18.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
17.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
17.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
16.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
16.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
16.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
16.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
16.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
15.7
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
15.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
15.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
15.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
15.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
15.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
14.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
14.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
13.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
13.2
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
13.2
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
13.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
12.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
12.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
12.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
12.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
12.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
12.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
12.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
11.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
11.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
10.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
9.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
8.9
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
7.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
7.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
7.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
7.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
5.8
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
2.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
1.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
1.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
303.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 303.7
Samples: 4
Max nTPM: 343.9
Min nTPM: 262.6
Sample A
Male
343.9
Sample B
Male
300.8
Sample C
Female
262.6
Sample D
Female
307.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.