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  • ABAT
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

67.630
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:109.8 nTPM
HPA Brain:254.0 nTPM
GTEx:109.8 nTPM
Pig:160.7 nTPM
Mouse:344.3 nTPM
Allen mouse:11.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA041690
Hypothalamus mean intensity 67.630
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus -
Mammillary nucleus 18.167
Periventricular hypothalamic nucleus 47.917
Supraoptic nucleus 30.027
Tuberal nucleus -
Ventral tuberomammillary nucleus -
Lateral preoptic area 19.660
Medial preoptic area 20.739
Suprachiasmatic nucleus 49.117
Paraventricular hypothalamic nucleus 23.431
Anterior hypothalamic area, central 23.814
Ventral medial hypothalamic nucleus 29.913
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 60.259
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 18.043
Dorsal medial hypothalamic nucleus -
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

254.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 217.1
1961 Female, age 42, unknown 254.3
2226 Male, age 75, left hemisphere 179.8
Dorsomedial nucleus
nTPM: 222.8
2041 Female, age 72, unknown 250.1
1989 Male, age 62, unknown 223.9
2017 Female, age 42, unknown 194.5
Lateral hypothalamic area
nTPM: 157.0
1791 Male, age 80, right hemisphere 222.2
2412 Male, age 62, unknown 145.7
2271 Male, age 75, both hemispheres 142.2
2228 Male, age 66, unknown 118.0
Mammillary body
nTPM: 209.7
1923 Female, age 72, unknown 287.6
1834 Female, age 42, unknown 226.7
1948 Female, age 72, unknown 224.8
2413 Male, age 66, unknown 157.4
1945 Male, age 80, right hemisphere 152.1
Paraventricular nucleus
nTPM: 147.6
2700 Male, age 62, unknown 147.6
Preoptic area
nTPM: 188.0
1907 Male, age 80, right hemisphere 218.0
1861 Female, age 42, unknown 211.7
2414 Female, age 72, unknown 134.3
Supraoptic nucleus
nTPM: 156.8
2835 Female, age 72, unknown 170.0
1894 Female, age 72, unknown 157.4
2043 Male, age 62, unknown 142.9
Ventromedial nucleus
nTPM: 254.0
1982 Female, age 72, unknown 269.6
1822 Female, age 42, unknown 238.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

109.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 109.8
Samples: 257

Max nTPM: 197.8
Min nTPM: 41.6
Std nTPM: 27.6
Median nTPM: 109.3
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 197.8
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 183.3
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 178.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 176.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 170.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 166.5
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 164.0
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 163.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 160.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 157.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 156.6
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 156.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 155.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 155.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 154.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 153.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 152.7
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 151.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 149.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 146.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 146.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 146.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 146.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 145.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 144.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 144.5
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 144.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 143.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 142.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 141.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 141.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 141.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 141.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 140.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 140.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 140.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 140.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 139.6
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 139.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 138.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 138.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 136.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 136.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 136.4
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 136.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 135.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 134.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 133.9
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 133.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 133.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 133.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 132.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 132.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 132.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 132.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 131.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 131.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 130.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 130.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 130.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 130.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 129.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 129.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 129.5
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 128.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 128.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 128.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 127.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 126.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 126.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 126.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 125.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 125.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 125.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 124.5
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 124.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 124.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 123.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 123.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 123.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 123.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 122.8
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 121.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 121.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 121.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 120.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 120.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 120.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 120.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 120.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 120.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 119.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 119.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 119.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 119.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 118.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 118.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 118.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 118.2
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 118.0
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 117.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 117.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 117.4
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 116.4
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 116.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 116.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 115.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 115.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 115.4
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 115.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 115.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 115.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 114.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 114.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 114.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 113.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 113.6
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 113.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 112.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 112.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 112.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 112.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 112.4
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 110.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 110.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 109.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 109.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 109.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 109.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 108.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 108.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 108.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 107.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 107.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 107.5
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 107.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 107.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 107.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 107.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 107.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 106.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 106.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 106.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 106.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 106.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 106.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 105.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 105.0
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 105.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 104.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 104.8
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 103.9
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 103.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 103.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 102.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 102.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 102.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 101.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 101.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 100.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 100.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 100.1
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 99.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 99.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 99.6
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 98.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 98.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 98.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 98.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 98.3
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 98.2
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 98.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 97.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 97.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 95.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 95.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 95.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 95.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 95.5
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 95.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 95.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 94.5
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 94.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 93.8
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 93.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 93.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 92.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 92.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 92.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 91.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 91.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 91.4
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 90.7
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 89.8
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 89.3
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 89.2
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 88.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 88.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 87.8
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 87.5
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 87.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 87.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 86.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 85.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 84.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 84.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 84.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 83.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 83.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 82.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 82.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 82.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 82.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 82.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 81.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 81.6
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 81.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 81.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 81.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 81.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 80.8
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 80.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 80.1
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 79.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 79.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 79.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 78.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 78.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 77.9
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 77.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 76.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 76.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 75.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 75.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 74.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 74.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 73.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 71.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 70.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 69.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 69.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 68.3
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 66.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 66.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 65.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 63.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 62.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 59.5
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 58.0
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 54.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 53.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 52.9
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 48.6
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 47.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 46.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 43.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 41.6
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 160.8
Samples: 4

Max nTPM: 203.2
Min nTPM: 122.1
Sample A Female 203.2
Sample B Female 177.9
Sample C Male 139.8
Sample D Male 122.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

344.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 344.3
Samples: 4

Max nTPM: 360.1
Min nTPM: 322.8
Sample A Male 322.8
Sample B Male 360.1
Sample C Female 344.1
Sample D Female 350.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 11.3
72079931 Antisense, RP_051017_03_B07, Mouse strain C57BL/6J (56 days, male) 13.1
68918934 Antisense, RP_050301_02_C02, Mouse strain C57BL/6J (56 days, male) 9.6

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