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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:275.0 nTPM
HPA Brain:132.4 nTPM
GTEx:275.0 nTPM
Pig:25.8 nTPM
Mouse:22.9 nTPM
Allen mouse:2.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 132.4
2226 Male, age 75, left hemisphere 159.0
1961 Female, age 42, unknown 105.9
Dorsomedial nucleus
nTPM: 118.7
2041 Female, age 72, unknown 135.4
1989 Male, age 62, unknown 115.4
2017 Female, age 42, unknown 105.3
Lateral hypothalamic area
nTPM: 130.5
1791 Male, age 80, right hemisphere 143.4
2271 Male, age 75, both hemispheres 141.4
2228 Male, age 66, unknown 129.6
2412 Male, age 62, unknown 107.8
Mammillary body
nTPM: 130.0
1923 Female, age 72, unknown 185.9
1948 Female, age 72, unknown 134.1
2413 Male, age 66, unknown 116.2
1945 Male, age 80, right hemisphere 108.3
1834 Female, age 42, unknown 105.5
Paraventricular nucleus
nTPM: 106.7
2700 Male, age 62, unknown 106.7
Preoptic area
nTPM: 125.1
1907 Male, age 80, right hemisphere 145.9
1861 Female, age 42, unknown 126.0
2414 Female, age 72, unknown 103.5
Supraoptic nucleus
nTPM: 123.6
1894 Female, age 72, unknown 147.2
2043 Male, age 62, unknown 120.1
2835 Female, age 72, unknown 103.5
Ventromedial nucleus
nTPM: 111.1
1822 Female, age 42, unknown 112.5
1982 Female, age 72, unknown 109.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

275.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 275.0
Samples: 257

Max nTPM: 459.5
Min nTPM: 125.2
Std nTPM: 63.1
Median nTPM: 270.5
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 459.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 455.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 443.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 439.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 438.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 430.1
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 424.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 423.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 413.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 411.3
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 410.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 398.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 392.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 388.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 387.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 387.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 386.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 379.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 378.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 378.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 374.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 373.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 373.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 373.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 370.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 367.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 365.1
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 364.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 362.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 351.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 351.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 347.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 347.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 343.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 340.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 339.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 339.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 339.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 337.7
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 337.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 336.3
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 336.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 334.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 333.9
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 332.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 330.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 328.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 328.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 327.5
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 327.4
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 326.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 323.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 319.7
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 318.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 318.5
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 317.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 317.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 317.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 316.8
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 315.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 315.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 313.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 312.5
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 312.3
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 311.1
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 309.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 309.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 308.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 307.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 307.2
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 306.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 306.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 305.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 304.5
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 302.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 302.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 301.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 301.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 298.9
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 298.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 298.3
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 296.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 295.8
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 295.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 294.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 294.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 293.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 292.2
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 291.0
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 290.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 290.0
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 290.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 289.5
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 289.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 289.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 289.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 288.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 287.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 287.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 286.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 284.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 284.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 283.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 283.6
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 282.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 281.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 281.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 281.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 281.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 279.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 279.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 278.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 278.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 277.6
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 277.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 276.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 276.0
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 275.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 275.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 275.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 275.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 273.7
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 273.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 273.5
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 272.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 272.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 271.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 270.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 270.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 270.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 270.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 270.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 269.8
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 269.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 268.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 268.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 266.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 264.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 262.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 262.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 261.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 260.7
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 260.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 260.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 260.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 260.0
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 257.3
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 257.2
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 257.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 256.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 255.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 255.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 255.3
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 255.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 254.5
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 254.4
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 253.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 252.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 251.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 249.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 249.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 248.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 246.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 246.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 246.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 245.6
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 245.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 245.3
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 244.6
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 244.1
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 244.0
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 242.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 242.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 242.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 240.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 240.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 239.7
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 237.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 236.6
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 236.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 234.5
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 234.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 234.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 234.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 233.5
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 233.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 233.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 232.5
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 232.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 231.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 231.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 230.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 228.8
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 227.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 226.4
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 226.3
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 225.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 224.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 222.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 222.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 222.4
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 222.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 221.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 220.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 220.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 219.5
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 218.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 218.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 218.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 218.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 218.1
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 217.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 215.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 215.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 214.5
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 213.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 213.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 212.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 212.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 212.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 211.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 210.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 207.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 205.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 205.0
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 203.7
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 203.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 203.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 203.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 202.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 200.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 200.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 199.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 198.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 198.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 197.9
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 197.3
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 194.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 192.8
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 192.4
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 192.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 191.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 190.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 189.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 188.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 183.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 183.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 175.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 173.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 171.7
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 170.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 170.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 166.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 164.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 153.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 144.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 125.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 25.8
Samples: 4

Max nTPM: 31.9
Min nTPM: 22.3
Sample A Female 31.9
Sample B Female 25.9
Sample C Male 23.2
Sample D Male 22.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.9
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 22.9
Samples: 4

Max nTPM: 26.0
Min nTPM: 21.7
Sample A Male 22.0
Sample B Male 26.0
Sample C Female 21.7
Sample D Female 21.9

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 2.1
513242 Antisense, RP_040810_01_D10, Mouse strain C57BL/6J (56 days, male) 2.1

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