HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:47.7 nTPM
HPA Brain:25.6 nTPM
GTEx:47.7 nTPM
FANTOM5:31.1 Scaled Tags Per Million
Pig:10.0 nTPM
Mouse:17.8 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 25.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.2
1898 Male, age 80, left hemisphere 31.4
2621 Female, age 67, right hemisphere 26.8
2148 Female, age 91, left hemisphere 24.5
2529 Female, age 94, left hemisphere 24.3
1855 Male, age 76, left hemisphere 24.2
1911 Female, age 85, right hemisphere 20.1
Dentate gyrus
nTPM: 24.0
2010 Male, age 76, both hemispheres 31.9
2530 Female, age 94, left hemisphere 24.9
1927 Female, age 91, both hemispheres 24.3
2246 Female, age 85, both hemispheres 23.1
2528 Male, age 74, both hemispheres 19.8
2531 Female, age 67, both hemispheres 19.7
Entorhinal gyrus
nTPM: 20.7
2764 Male, age 80, right hemisphere 23.8
1787 Male, age 76, left hemisphere 23.1
2117 Female, age 91, right hemisphere 22.1
2613 Female, age 94, left hemisphere 19.9
1938 Female, age 85, left hemisphere 19.8
2686 Male, age 75, right hemisphere 15.3
Hippocampus, CA1
nTPM: 25.2
2749 Male, age 80, left hemisphere 37.0
2527 Male, age 74, both hemispheres 25.0
1873 Female, age 85, both hemispheres 22.7
2082 Female, age 91, right hemisphere 21.5
2045 Male, age 76, both hemispheres 19.9
Hippocampus, CA2
nTPM: 25.6
1963 Male, age 80, left hemisphere 34.3
2249 Male, age 74, both hemispheres 26.3
1892 Male, age 76, both hemispheres 25.8
2437 Female, age 94, left hemisphere 25.0
1940 Female, age 85, left hemisphere 21.3
2113 Female, age 91, right hemisphere 20.7
Hippocampus, CA3
nTPM: 25.2
2137 Male, age 80, left hemisphere 29.6
2436 Male, age 74, both hemispheres 27.0
1867 Male, age 76, both hemispheres 25.7
2861 Female, age 67, both hemispheres 23.5
1891 Female, age 85, both hemispheres 23.3
2620 Female, age 94, left hemisphere 22.0
Parahippocampal cortex
nTPM: 21.9
2018 Male, age 76, both hemispheres 25.1
2250 Female, age 67, right hemisphere 24.0
2532 Female, age 72, left hemisphere 24.0
1850 Male, age 80, both hemispheres 23.9
1990 Female, age 91, right hemisphere 23.7
1933 Female, age 85, both hemispheres 23.2
2245 Female, age 91, both hemispheres 22.0
2692 Male, age 74, both hemispheres 19.1
2622 Female, age 67, right hemisphere 17.3
2693 Female, age 94, both hemispheres 16.2
Perirhinal gyrus
nTPM: 24.2
1794 Male, age 80, right hemisphere 27.4
1847 Female, age 91, left hemisphere 27.3
1841 Female, age 85, right hemisphere 25.7
2521 Female, age 94, right hemisphere 22.2
2848 Male, age 76, right hemisphere 18.3
Subiculum
nTPM: 24.0
1901 Male, age 80, both hemispheres 26.2
2438 Female, age 94, left hemisphere 25.3
1977 Female, age 85, both hemispheres 25.2
2042 Male, age 76, both hemispheres 23.6
2729 Female, age 91, right hemisphere 22.5
2619 Male, age 74, both hemispheres 20.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 47.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.7
Samples: 197

Max nTPM: 118.8
Min nTPM: 24.0
Std nTPM: 15.1
Median nTPM: 45.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 118.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 105.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 97.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 97.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 84.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 83.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 83.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 82.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 80.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 77.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 76.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 31.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.1
FF:10169-103B7 60 years, female 31.1
FF:10153-102I9 76 years, female 31.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 10.0
Pig sample Sample description nTPM
Subiculum
nTPM: 8.1
Samples: 4

Max nTPM: 11.1
Min nTPM: 6.4
Sample A Female 11.1
Sample B Female 6.4
Sample C Male 7.6
Sample D Male 7.1
Dorsal hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 13.7
Min nTPM: 8.0
Sample A Female 13.7
Sample B Female 9.1
Sample C Male 9.4
Sample D Male 8.0
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.3
Sample A Female 8.5
Sample B Female 7.3
Sample C Male 6.8
Sample D Male 6.3
Ventral hippocampus
nTPM: 9.2
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.8
Sample A Female 9.9
Sample B Female 6.8
Sample C Male 10.0
Sample D Male 10.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 13.0
Sample A Male 17.3
Sample B Male 13.0
Sample C Female 20.0
Sample D Female 21.1
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 19.4
Min nTPM: 14.7
Sample A Male 18.1
Sample B Male 18.3
Sample C Female 19.4
Sample D Female 14.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
71735827 Antisense, RP_051010_03_C01, Mouse strain C57BL/6J (56 days, male) 6.1

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