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  • TISSUE

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  • CNIH2
TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:85.8 nTPM
HPA Brain:112.9 nTPM
GTEx:85.8 nTPM
Mouse:88.0 nTPM
Allen mouse:1.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 112.9
2226 Male, age 75, left hemisphere 138.7
1961 Female, age 42, unknown 87.0
Dorsomedial nucleus
nTPM: 69.9
1989 Male, age 62, unknown 106.8
2041 Female, age 72, unknown 56.8
2017 Female, age 42, unknown 46.1
Lateral hypothalamic area
nTPM: 68.0
2271 Male, age 75, both hemispheres 87.2
1791 Male, age 80, right hemisphere 70.6
2412 Male, age 62, unknown 59.8
2228 Male, age 66, unknown 54.3
Mammillary body
nTPM: 36.2
1923 Female, age 72, unknown 46.7
1945 Male, age 80, right hemisphere 36.6
2413 Male, age 66, unknown 36.6
1948 Female, age 72, unknown 35.4
1834 Female, age 42, unknown 25.9
Paraventricular nucleus
nTPM: 51.7
2700 Male, age 62, unknown 51.7
Preoptic area
nTPM: 58.5
1907 Male, age 80, right hemisphere 82.4
1861 Female, age 42, unknown 48.8
2414 Female, age 72, unknown 44.3
Supraoptic nucleus
nTPM: 45.7
2835 Female, age 72, unknown 55.6
1894 Female, age 72, unknown 49.4
2043 Male, age 62, unknown 32.2
Ventromedial nucleus
nTPM: 81.2
1982 Female, age 72, unknown 92.3
1822 Female, age 42, unknown 70.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 85.8
Samples: 257

Max nTPM: 211.7
Min nTPM: 9.1
Std nTPM: 32.9
Median nTPM: 84.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 211.7
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 182.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 170.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 166.5
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 163.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 162.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 162.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 158.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 153.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 152.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 151.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 149.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 143.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 142.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 142.1
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 139.7
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 136.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 133.1
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 132.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 131.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 130.8
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 129.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 128.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 128.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 128.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 127.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 127.3
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 126.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 125.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 124.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 124.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 123.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 123.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 122.5
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 122.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 122.0
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 121.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 121.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 120.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 120.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 119.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 119.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 118.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 118.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 117.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 117.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 115.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 114.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 113.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 113.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 113.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 113.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 111.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 111.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 111.7
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 111.6
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 111.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 111.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 109.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 109.3
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 108.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 108.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 108.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 108.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 108.1
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 106.8
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 106.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 103.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 103.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 102.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 102.6
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 101.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 101.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 100.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 100.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 100.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 100.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 100.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 99.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 99.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 97.8
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 96.8
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 96.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 96.3
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 96.2
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 96.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 95.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 95.6
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 95.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 95.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 95.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 95.2
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 94.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 94.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 93.1
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 93.1
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 93.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 92.9
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 91.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 91.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 91.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 91.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 90.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 89.9
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 89.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 89.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 89.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 89.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 88.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 88.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 88.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 87.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 87.6
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 87.0
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 86.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 86.1
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 85.9
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 85.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 85.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 85.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 85.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 85.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 85.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 84.7
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 84.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 84.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 84.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 84.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 84.4
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 84.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 83.8
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 83.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 83.2
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 83.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 82.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 82.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 82.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 80.6
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 80.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 80.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 80.2
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 79.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 79.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 78.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 77.8
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 77.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 77.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 76.4
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 76.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 76.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 76.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 75.9
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 75.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 75.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 75.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 75.0
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 74.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 74.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 74.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 73.7
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 73.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 73.5
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 73.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 73.3
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 73.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 72.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 72.1
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 71.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 71.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 71.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 70.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 70.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 70.6
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 70.5
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 70.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 70.4
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 70.3
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 69.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 69.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 69.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 69.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 69.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 69.5
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 69.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 68.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 68.0
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 67.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 67.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 66.9
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 66.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 66.6
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 66.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 65.2
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 65.0
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 64.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 64.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 63.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 63.1
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 62.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 62.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 62.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 60.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 60.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 60.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 60.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 58.3
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 57.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 57.3
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 56.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 56.0
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 55.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 55.0
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 54.4
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 53.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 53.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 52.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 52.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 52.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 52.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 49.3
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 49.1
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 48.5
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 47.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 46.6
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 46.6
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 46.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 45.1
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 44.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 44.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 44.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 44.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 43.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 42.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 42.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 41.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 40.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 40.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 40.0
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 40.0
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 39.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 39.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 39.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 38.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 36.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 36.8
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 36.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 33.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 32.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 29.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 26.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 26.1
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 22.2
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 20.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 17.7
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 10.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 9.1
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HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 88.0
Samples: 4

Max nTPM: 101.4
Min nTPM: 81.8
Sample A Male 86.3
Sample B Male 101.4
Sample C Female 82.4
Sample D Female 81.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.7
2109 Antisense, RP_Baylor_102694, Mouse strain C57BL/6J (56 days, male) 1.7
2110 Antisense, RP_Baylor_102694, Mouse strain C57BL/6J (56 days, male) 0.7

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