We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RBM4
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RBM4
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:61.8 nTPM
HPA Brain:97.0 nTPM
GTEx:61.8 nTPM
Pig:55.4 nTPM
Mouse:16.5 nTPM
Allen mouse:3.6 Expression energy

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

97.0
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 92.4
1961 Female, age 42, unknown 96.4
2226 Male, age 75, left hemisphere 88.3
Dorsomedial nucleus
nTPM: 78.9
2041 Female, age 72, unknown 93.2
2017 Female, age 42, unknown 78.5
1989 Male, age 62, unknown 65.0
Lateral hypothalamic area
nTPM: 78.7
2228 Male, age 66, unknown 87.0
2271 Male, age 75, both hemispheres 80.6
1791 Male, age 80, right hemisphere 76.7
2412 Male, age 62, unknown 70.4
Mammillary body
nTPM: 67.2
2413 Male, age 66, unknown 68.2
1923 Female, age 72, unknown 67.9
1834 Female, age 42, unknown 67.2
1945 Male, age 80, right hemisphere 67.2
1948 Female, age 72, unknown 65.3
Paraventricular nucleus
nTPM: 82.2
2700 Male, age 62, unknown 82.2
Preoptic area
nTPM: 80.6
1907 Male, age 80, right hemisphere 85.6
2414 Female, age 72, unknown 81.2
1861 Female, age 42, unknown 74.9
Supraoptic nucleus
nTPM: 75.1
2835 Female, age 72, unknown 77.4
2043 Male, age 62, unknown 74.7
1894 Female, age 72, unknown 73.3
Ventromedial nucleus
nTPM: 97.0
1822 Female, age 42, unknown 99.6
1982 Female, age 72, unknown 94.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 61.8
Samples: 202

Max nTPM: 133.1
Min nTPM: 32.9
Std nTPM: 13.4
Median nTPM: 60.2
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 133.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 106.6
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 99.0
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 97.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 96.3
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 96.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 94.7
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 91.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 90.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 89.9
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 87.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 86.7
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 86.1
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 85.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 84.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 83.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 81.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 79.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 78.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 77.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 77.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 76.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 75.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 74.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 74.6
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 74.0
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 73.8
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 73.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 73.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 72.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 72.7
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 72.7
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 72.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 71.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 71.7
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 71.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 71.5
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 71.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 70.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 70.7
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 70.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 69.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 68.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 68.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 68.3
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 67.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 67.7
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 67.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 67.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 67.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 67.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 67.1
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 66.9
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 66.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 66.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 66.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 66.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 66.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 66.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 66.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 65.9
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 65.7
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 65.4
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 64.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 64.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 64.3
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 64.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 64.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 64.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 64.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 63.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 63.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 63.5
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 63.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 63.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 63.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 63.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 62.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 62.8
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 62.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 62.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 62.7
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 62.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 62.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 62.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 62.1
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 62.1
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 62.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 61.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 61.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 61.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 61.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 61.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 61.1
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 61.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 60.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 60.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 60.5
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 60.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 60.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 60.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 60.2
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 60.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 59.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 59.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 59.9
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 59.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 59.7
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 59.6
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 59.6
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 59.5
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 59.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 59.4
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 59.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 59.2
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 58.9
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 58.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 58.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 58.3
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 58.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 58.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 58.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 58.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 58.1
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 58.1
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 58.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 58.0
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 57.9
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 57.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 57.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 57.7
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 57.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 57.2
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 57.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 56.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 56.3
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 56.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 55.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 55.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 55.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 55.0
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 54.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 54.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 54.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 54.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 54.4
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 53.7
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 53.5
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 53.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 53.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 53.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 52.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 52.6
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 52.5
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 52.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 52.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 51.9
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 51.6
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 51.6
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 51.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 51.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 51.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 51.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 51.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 50.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 50.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 50.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 50.1
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 50.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 49.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 49.8
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 49.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 49.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 48.9
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 48.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 48.7
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 48.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 47.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 47.0
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 47.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 46.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 46.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 46.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 46.0
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 45.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 45.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 45.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 44.6
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 44.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 44.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 44.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 44.1
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 43.9
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 43.8
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 43.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 41.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 40.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 40.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 40.3
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 38.6
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 37.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 32.9
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

55.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 55.5
Samples: 4

Max nTPM: 58.0
Min nTPM: 52.4
Sample A Female 56.4
Sample B Female 58.0
Sample C Male 52.4
Sample D Male 55.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 16.6
Samples: 4

Max nTPM: 19.5
Min nTPM: 14.5
Sample A Male 14.5
Sample B Male 15.6
Sample C Female 19.5
Sample D Female 16.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.6
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.6
888 Antisense, RP_Baylor_103001, Mouse strain C57BL/6J (56 days, male) 7.2
889 Antisense, RP_Baylor_103001, Mouse strain C57BL/6J (56 days, male) 3.1
74431604 Antisense, RP_060207_02_B12, Mouse strain C57BL/6J (56 days, male) 0.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org