We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
CNP
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE
  • INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • HELP & FAQ
  • ANTIBODY AVAILABILITY
  • DISCLAIMER
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Category
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type group
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
ipTM
Category
Category
Category
Category
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCTURE

  • INTERACTION

  • CNP
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

172.793
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:265.9 nTPM
HPA Brain:905.2 nTPM
GTEx:265.9 nTPM
Pig:411.2 nTPM
Mouse:251.3 nTPM
Allen mouse:12.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody HPA023338
Hypothalamus mean intensity 172.793
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 113.278
Mammillary nucleus 66.287
Periventricular hypothalamic nucleus 172.793
Supraoptic nucleus -
Tuberal nucleus 114.415
Ventral tuberomammillary nucleus 65.134
Lateral preoptic area 99.939
Medial preoptic area 103.646
Suprachiasmatic nucleus 82.100
Paraventricular hypothalamic nucleus 109.402
Anterior hypothalamic area, central 88.057
Ventral medial hypothalamic nucleus 76.149
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 166.082
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 103.700
Dorsal medial hypothalamic nucleus 88.763
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

905.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 172.7
2226 Male, age 75, left hemisphere 231.3
1961 Female, age 42, unknown 114.0
Dorsomedial nucleus
nTPM: 367.2
2017 Female, age 42, unknown 585.0
1989 Male, age 62, unknown 363.8
2041 Female, age 72, unknown 152.7
Lateral hypothalamic area
nTPM: 535.7
2271 Male, age 75, both hemispheres 678.6
2228 Male, age 66, unknown 667.9
1791 Male, age 80, right hemisphere 468.7
2412 Male, age 62, unknown 327.5
Mammillary body
nTPM: 905.2
1945 Male, age 80, right hemisphere 1091.3
1948 Female, age 72, unknown 1022.8
1834 Female, age 42, unknown 1013.1
1923 Female, age 72, unknown 769.7
2413 Male, age 66, unknown 629.3
Paraventricular nucleus
nTPM: 655.4
2700 Male, age 62, unknown 655.4
Preoptic area
nTPM: 569.9
2414 Female, age 72, unknown 932.8
1861 Female, age 42, unknown 568.5
1907 Male, age 80, right hemisphere 208.5
Supraoptic nucleus
nTPM: 548.5
2043 Male, age 62, unknown 736.2
1894 Female, age 72, unknown 522.6
2835 Female, age 72, unknown 386.8
Ventromedial nucleus
nTPM: 129.9
1982 Female, age 72, unknown 153.5
1822 Female, age 42, unknown 106.4

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

265.9
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 265.9
Samples: 257

Max nTPM: 1193.7
Min nTPM: 33.6
Std nTPM: 219.4
Median nTPM: 184.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 1193.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 1177.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 1029.2
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 1016.2
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 954.5
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 905.8
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 903.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 900.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 863.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 795.8
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 757.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 734.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 729.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 725.3
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 715.5
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 698.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 690.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 687.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 672.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 670.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 650.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 649.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 644.4
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 638.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 622.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 621.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 599.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 565.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 551.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 541.4
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 521.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 511.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 497.7
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 494.7
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 476.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 469.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 453.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 440.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 429.6
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 429.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 426.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 425.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 423.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 421.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 420.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 415.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 414.1
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 412.7
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 411.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 402.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 394.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 394.8
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 394.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 387.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 386.2
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 381.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 381.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 380.2
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 380.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 374.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 369.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 365.9
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 361.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 360.5
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 357.7
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 355.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 346.4
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 343.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 341.1
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 333.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 328.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 322.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 314.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 312.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 306.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 295.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 291.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 289.8
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 288.4
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 284.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 283.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 283.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 281.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 280.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 277.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 277.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 274.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 270.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 267.5
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 264.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 261.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 259.6
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 258.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 257.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 246.4
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 246.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 245.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 242.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 240.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 239.2
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 238.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 234.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 232.3
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 232.1
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 228.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 227.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 226.0
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 225.9
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 225.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 224.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 221.9
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 218.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 213.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 212.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 211.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 210.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 207.3
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 202.7
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 201.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 200.6
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 197.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 194.3
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 194.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 193.9
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 192.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 191.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 189.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 186.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 184.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 184.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 183.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 183.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 182.6
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 178.7
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 177.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 177.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 176.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 171.8
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 170.4
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 164.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 164.6
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 164.2
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 163.2
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 160.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 157.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 153.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 153.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 153.0
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 149.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 149.3
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 147.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 147.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 147.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 146.8
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 145.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 144.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 142.7
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 142.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 142.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 142.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 136.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 135.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 134.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 133.9
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 133.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 131.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 129.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 129.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 128.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 124.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 122.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 122.0
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 121.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 120.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 120.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 120.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 120.1
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 119.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 119.0
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 118.5
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 118.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 118.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 117.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 117.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 117.6
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 117.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 116.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 116.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 115.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 115.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 114.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 114.5
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 113.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 112.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 112.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 111.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 110.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 110.3
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 110.3
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 110.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 107.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 107.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 107.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 105.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 105.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 104.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 103.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 103.3
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 102.9
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 102.8
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 102.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 102.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 99.4
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 99.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 99.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 99.0
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 98.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 98.5
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 98.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 97.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 96.8
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 96.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 96.2
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 95.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 95.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 95.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 92.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 92.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 90.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 90.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 89.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 89.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 88.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 86.1
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 84.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 82.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 82.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 81.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 80.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 80.2
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 79.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 79.3
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 78.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 75.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 74.5
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 74.4
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 72.6
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 70.7
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 70.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 65.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 62.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 62.0
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 59.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 58.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 56.7
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 42.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 33.6
Show allShow less

HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

411.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 411.2
Samples: 4

Max nTPM: 521.6
Min nTPM: 173.2
Sample A Female 506.1
Sample B Female 521.6
Sample C Male 443.8
Sample D Male 173.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

251.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 251.3
Samples: 4

Max nTPM: 267.6
Min nTPM: 219.0
Sample A Male 219.0
Sample B Male 252.4
Sample C Female 266.3
Sample D Female 267.6

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

12.3
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 12.3
77371841 Antisense, RP_070129_01_A04, Mouse strain C57BL/6J (56 days, male) 15.7
79488913 Antisense, RP_070129_01_A04, Mouse strain C57BL/6J (56 days, male) 12.6
1175 Antisense, RP_040407_02_H04, Mouse strain C57BL/6J (56 days, male) 8.9
1176 Antisense, RP_040407_02_H04, Mouse strain C57BL/6J (56 days, male) 7.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

Facebook logo X logo Bluesky logo Linkedin logo RSS feed logo contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo