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  • SUMMARY

  • TISSUE

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  • GNB2
BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:161.1 nTPM
HPA Brain:172.4 nTPM
GTEx:161.1 nTPM
Pig:115.5 nTPM
Mouse:323.3 nTPM
Allen mouse:13.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

172.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 170.3
1961 Female, age 42, unknown 188.1
2226 Male, age 75, left hemisphere 152.5
Dorsomedial nucleus
nTPM: 157.2
2041 Female, age 72, unknown 186.8
1989 Male, age 62, unknown 152.3
2017 Female, age 42, unknown 132.5
Lateral hypothalamic area
nTPM: 151.9
1791 Male, age 80, right hemisphere 215.9
2412 Male, age 62, unknown 140.4
2271 Male, age 75, both hemispheres 136.4
2228 Male, age 66, unknown 114.8
Mammillary body
nTPM: 120.2
2413 Male, age 66, unknown 136.5
1923 Female, age 72, unknown 133.4
1945 Male, age 80, right hemisphere 115.7
1948 Female, age 72, unknown 110.6
1834 Female, age 42, unknown 104.8
Paraventricular nucleus
nTPM: 104.4
2700 Male, age 62, unknown 104.4
Preoptic area
nTPM: 137.2
1907 Male, age 80, right hemisphere 151.4
1861 Female, age 42, unknown 142.3
2414 Female, age 72, unknown 117.8
Supraoptic nucleus
nTPM: 172.4
2043 Male, age 62, unknown 184.3
1894 Female, age 72, unknown 175.3
2835 Female, age 72, unknown 157.6
Ventromedial nucleus
nTPM: 168.2
1822 Female, age 42, unknown 172.3
1982 Female, age 72, unknown 164.2

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

161.1
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 161.1
Samples: 257

Max nTPM: 366.8
Min nTPM: 76.7
Std nTPM: 38.4
Median nTPM: 157.6
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 366.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 288.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 281.5
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 265.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 262.2
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 259.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 255.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 246.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 241.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 235.3
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 232.7
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 227.3
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 222.7
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 220.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 218.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 216.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 216.0
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 215.6
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 214.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 214.1
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 214.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 213.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 212.7
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 212.2
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 211.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 211.1
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 209.6
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 209.0
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 208.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 207.7
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 207.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 207.2
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 205.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 204.0
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 203.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 202.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 202.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 202.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 202.3
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 201.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 196.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 195.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 195.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 195.0
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 194.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 193.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 191.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 191.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 190.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 188.5
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 187.2
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 186.4
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 185.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 185.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 184.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 183.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 183.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 183.4
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 183.1
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 183.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 182.3
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 181.4
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 180.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 179.3
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 179.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 178.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 178.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 178.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 178.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 178.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 178.4
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 177.9
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 177.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 176.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 176.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 176.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 174.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 174.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 174.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 174.0
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 173.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 172.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 172.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 172.5
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 172.5
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 172.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 171.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 170.9
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 170.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 170.4
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 169.9
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 169.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 169.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 169.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 169.6
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 169.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 168.4
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 168.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 167.1
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 166.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 166.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 166.1
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 166.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 165.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 164.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 164.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 163.9
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 163.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 163.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 162.6
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 162.3
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 161.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 161.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 161.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 161.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 161.6
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 161.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 161.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 161.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 160.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 159.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 159.5
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 159.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 158.8
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 158.2
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 158.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 157.8
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 157.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 157.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 157.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 157.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 156.7
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 156.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 156.3
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 156.2
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 156.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 155.9
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 155.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 155.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 154.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 154.3
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 153.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 153.6
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 153.4
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 153.1
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 152.9
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 152.6
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 151.3
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 150.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 150.7
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 150.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 150.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 149.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 149.2
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 148.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 148.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 148.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 148.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 147.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 146.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 146.7
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 146.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 146.2
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 146.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 146.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 145.8
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 145.5
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 145.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 144.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 143.5
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 143.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 143.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 143.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 143.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 142.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 142.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 142.5
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 142.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 142.0
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 141.4
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 140.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 140.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 138.0
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 137.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 137.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 137.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 137.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 136.9
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 136.7
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 136.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 135.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 135.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 135.0
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 133.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 133.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 133.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 133.3
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 133.2
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 133.2
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 132.8
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 132.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 132.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 131.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 131.7
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 131.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 131.5
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 131.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 130.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 130.2
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 129.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 129.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 129.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 127.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 127.4
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 126.5
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 126.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 124.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 124.4
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 123.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 121.8
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 121.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 119.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 119.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 118.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 118.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 117.8
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 116.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 116.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 115.8
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 115.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 114.3
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 114.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 114.1
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 113.8
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 112.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 112.5
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 112.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 111.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 111.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 111.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 110.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 110.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 110.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 109.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 109.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 109.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 108.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 105.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 104.7
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 102.9
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 98.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 94.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 93.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 93.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 90.7
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 90.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 76.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

115.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 115.5
Samples: 4

Max nTPM: 152.5
Min nTPM: 89.0
Sample A Female 152.5
Sample B Female 108.6
Sample C Male 111.9
Sample D Male 89.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

323.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 323.3
Samples: 4

Max nTPM: 332.7
Min nTPM: 309.4
Sample A Male 332.7
Sample B Male 330.9
Sample C Female 309.4
Sample D Female 320.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

13.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 13.2
513 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 13.2
512 Antisense, RP_Baylor_102825, Mouse strain C57BL/6J (56 days, male) 8.2

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