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  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

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  • BLOOD

  • CELL LINE

  • STRUCTURE

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  • AQP4
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

190.191
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:108.0 nTPM
HPA Brain:924.9 nTPM
GTEx:108.0 nTPM
Pig:602.2 nTPM
Mouse:117.2 nTPM
Allen mouse:3.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity.

, antibody CAB005079
Hypothalamus mean intensity 190.191
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity.

FRONT BACK
Dorsal tuberomammillary nucleus 65.749
Mammillary nucleus -
Periventricular hypothalamic nucleus 190.191
Supraoptic nucleus 119.439
Tuberal nucleus 110.050
Ventral tuberomammillary nucleus 94.813
Lateral preoptic area 67.569
Medial preoptic area 78.959
Suprachiasmatic nucleus 125.640
Paraventricular hypothalamic nucleus 78.598
Anterior hypothalamic area, central 55.139
Ventral medial hypothalamic nucleus 95.943
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 126.469
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 55.525
Dorsal medial hypothalamic nucleus 94.778
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

924.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 345.9
2226 Male, age 75, left hemisphere 360.4
1961 Female, age 42, unknown 331.4
Dorsomedial nucleus
nTPM: 500.8
1989 Male, age 62, unknown 685.7
2041 Female, age 72, unknown 408.9
2017 Female, age 42, unknown 407.9
Lateral hypothalamic area
nTPM: 395.1
1791 Male, age 80, right hemisphere 655.0
2271 Male, age 75, both hemispheres 363.9
2412 Male, age 62, unknown 317.6
2228 Male, age 66, unknown 243.9
Mammillary body
nTPM: 612.5
1923 Female, age 72, unknown 699.0
1945 Male, age 80, right hemisphere 684.1
1834 Female, age 42, unknown 659.2
2413 Male, age 66, unknown 630.3
1948 Female, age 72, unknown 389.7
Paraventricular nucleus
nTPM: 263.8
2700 Male, age 62, unknown 263.8
Preoptic area
nTPM: 488.6
1861 Female, age 42, unknown 550.9
1907 Male, age 80, right hemisphere 486.2
2414 Female, age 72, unknown 428.8
Supraoptic nucleus
nTPM: 924.9
1894 Female, age 72, unknown 1313.6
2043 Male, age 62, unknown 1089.4
2835 Female, age 72, unknown 371.7
Ventromedial nucleus
nTPM: 337.1
1822 Female, age 42, unknown 338.6
1982 Female, age 72, unknown 335.7

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.0
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 108.0
Samples: 257

Max nTPM: 448.1
Min nTPM: 17.8
Std nTPM: 65.9
Median nTPM: 93.0
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 448.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 364.0
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 346.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 325.4
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 318.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 315.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 285.8
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 270.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 264.0
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 252.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 252.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 250.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 250.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 243.0
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 232.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 231.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 224.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 223.9
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 220.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 219.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 215.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 207.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 204.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 201.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 198.3
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 189.4
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 187.9
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 187.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 186.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 186.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 185.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 183.4
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 179.9
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 179.3
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 174.2
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 173.2
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 164.7
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 160.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 159.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 156.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 154.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 152.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 152.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 151.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 150.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 148.5
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 148.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 147.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 147.2
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 145.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 145.0
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 144.4
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 141.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 140.7
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 138.5
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 138.3
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 138.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 137.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 137.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 137.6
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 137.3
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 136.4
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 136.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 136.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 134.3
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 133.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 133.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 130.2
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 129.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 128.7
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 127.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 127.7
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 127.0
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 125.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 124.7
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 124.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 124.5
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 123.4
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 122.2
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 122.2
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 120.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 120.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 120.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 119.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 118.0
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 117.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 117.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 115.1
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 115.0
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 112.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 112.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 111.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 111.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 111.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 110.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 110.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 109.6
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 108.5
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 108.5
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 108.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 107.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 106.1
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 105.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 105.3
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 104.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 104.6
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 104.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 104.0
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 102.7
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 102.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 100.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 100.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 100.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 99.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 99.3
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 98.5
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 98.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 98.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 97.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 96.7
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 95.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 95.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 95.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 94.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 94.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 93.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 93.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 93.1
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 93.0
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 92.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 91.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 90.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 89.9
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 89.2
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 88.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 88.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 88.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 87.5
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 87.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 87.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 86.7
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 86.4
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 86.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 85.1
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 84.8
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 84.8
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 84.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 82.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 82.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 82.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 81.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 81.1
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 80.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 80.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 79.8
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 78.9
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 78.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 78.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 78.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 77.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 77.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 76.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 75.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 75.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 74.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 74.1
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 73.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 72.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 72.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 71.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 71.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 71.1
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 70.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 70.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 70.3
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 70.1
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 69.6
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 68.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 68.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 68.0
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 68.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 67.3
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 66.8
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 66.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 66.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 65.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 65.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 65.1
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 64.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 64.5
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 64.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 64.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 64.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 63.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 62.8
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 62.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 62.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 62.0
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 61.8
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 61.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 61.1
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 61.1
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 59.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 59.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 58.7
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 58.4
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 58.3
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 57.8
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 56.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 56.3
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 56.3
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 56.2
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 54.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 52.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 51.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 51.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 51.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 51.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 50.9
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 50.5
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 50.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 49.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 48.4
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 48.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 47.6
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 47.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 47.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 46.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 45.3
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 45.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 44.5
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 44.4
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 43.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 42.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 40.6
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 40.5
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 40.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 40.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 39.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 38.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 37.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 35.7
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 35.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 35.5
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 35.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 34.5
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 34.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 34.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 33.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 32.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 32.5
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 31.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 27.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 25.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 25.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 20.5
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 17.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

602.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 602.2
Samples: 4

Max nTPM: 632.4
Min nTPM: 572.0
Sample A Female 572.0
Sample B Female 632.4
Sample C Male 624.7
Sample D Male 579.6

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 117.2
Samples: 4

Max nTPM: 130.2
Min nTPM: 103.1
Sample A Male 103.1
Sample B Male 129.0
Sample C Female 106.6
Sample D Female 130.2

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 3.2
77454660 Antisense, RP_070129_01_C02, Mouse strain C57BL/6J (56 days, male) 3.9
79556722 Antisense, RP_071204_01_E02, Mouse strain C57BL/6J (56 days, male) 3.4
108 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 2.4
109 Antisense, RP_040324_01_F07, Mouse strain C57BL/6J (56 days, male) 1.2

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