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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
119.3
nTPM
HPA Brain:
108.4
nTPM
GTEx:
119.3
nTPM
FANTOM5:
333.7
Scaled Tags Per Million
Pig:
44.2
nTPM
Mouse:
168.2
nTPM
Allen mouse:
7.6
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
108.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 85.4
1870
Female, age 42, unknown
134.8
2828
Female, age 72, unknown
115.1
2019
Male, age 18, unknown
89.4
1830
Male, age 51, unknown
87.7
1833
Male, age 53, unknown
86.6
2411
Female, age 72, unknown
86.4
1827
Male, age 72, unknown
79.2
2586
Male, age 75, left hemisphere
61.6
2219
Male, age 76, both hemispheres
59.0
2666
Male, age 74, left hemisphere
54.6
Dorsal raphe nucleus nTPM: 99.8
2750
Male, age 76, both hemispheres
114.3
2016
Female, age 72, unknown
107.5
2298
Female, age 72, unknown
106.5
1828
Male, age 53, unknown
93.3
2047
Male, age 72, unknown
77.5
Inferior colliculus nTPM: 99.3
2097
Female, age 72, unknown
111.0
1848
Female, age 42, unknown
109.7
2849
Male, age 72, unknown
93.8
1890
Male, age 53, unknown
82.8
Median raphe nucleus nTPM: 80.5
2220
Male, age 76, midline
80.5
Periaquaductal grey, anterior nTPM: 87.5
2502
Female, age 75, unknown
114.9
1795
Male, age 51, unknown
77.4
1947
Male, age 18, unknown
70.2
Periaquaductal grey, dorsal nTPM: 99.4
1840
Male, age 53, unknown
110.7
2464
Female, age 72, unknown
97.8
2850
Male, age 76, both hemispheres
97.7
1831
Male, age 72, unknown
91.3
Periaquaductal grey, lateral nTPM: 85.2
2053
Male, age 18, unknown
104.3
2140
Male, age 76, both hemispheres
93.3
2272
Male, age 74, both hemispheres
58.0
Pretectal area nTPM: 88.8
2316
Male, age 76, right hemisphere
110.3
2667
Female, age 75, unknown
105.4
2273
Male, age 74, both hemispheres
103.0
2224
Female, age 72, unknown
100.2
1815
Male, age 53, unknown
91.8
1944
Female, age 72, unknown
89.7
1817
Female, age 42, unknown
87.8
2825
Male, age 18, unknown
79.5
2407
Male, age 75, both hemispheres
75.5
1816
Male, age 51, unknown
70.5
2007
Male, age 72, unknown
62.7
Red nucleus nTPM: 108.4
1954
Female, age 42, unknown
135.0
1865
Male, age 51, unknown
134.9
1821
Female, age 72, unknown
132.4
1904
Male, age 53, unknown
124.6
2227
Male, age 72, unknown
121.2
2503
Female, age 72, unknown
118.6
2769
Male, age 72, unknown
116.6
2823
Male, age 76, right hemisphere
115.6
2785
Male, age 18, unknown
99.6
2725
Female, age 75, unknown
87.3
2588
Male, age 74, left hemisphere
72.1
2584
Male, age 75, left hemisphere
43.1
Substantia nigra nTPM: 76.8
2699
Male, age 18, unknown
104.4
1889
Female, age 72, unknown
87.8
2241
Male, age 72, unknown
86.6
1851
Male, age 51, unknown
83.9
2409
Female, age 72, unknown
80.5
1916
Female, age 42, unknown
78.7
1941
Male, age 53, unknown
75.1
2590
Female, age 75, unknown
64.7
2583
Male, age 75, right hemisphere
58.5
2665
Male, age 74, both hemispheres
47.7
Superior colliculus nTPM: 100.4
1913
Female, age 42, unknown
163.0
1995
Male, age 72, unknown
136.3
2587
Male, age 74, left hemisphere
109.3
2664
Male, age 75, both hemispheres
92.1
1839
Male, age 51, unknown
90.4
1895
Male, age 76, right hemisphere
88.1
1796
Male, age 53, unknown
86.8
2087
Female, age 72, unknown
83.2
2668
Female, age 75, unknown
83.1
2261
Male, age 18, unknown
71.5
Ventral tegmental area nTPM: 100.0
2223
Female, age 72, unknown
143.0
1915
Female, age 42, unknown
95.0
2021
Male, age 53, unknown
94.4
1942
Male, age 51, unknown
94.0
2410
Female, age 72, unknown
91.5
2218
Male, age 76, both hemispheres
82.1
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
119.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 119.3
Samples: 139
Max nTPM: 271.9
Min nTPM: 37.3
Std nTPM: 39.9
Median nTPM: 117.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
271.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
230.2
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
223.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
199.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
198.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
194.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
193.4
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
189.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
187.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
183.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
176.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
176.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
174.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
173.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
169.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
169.0
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
165.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
163.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
163.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
160.1
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
160.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
158.9
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
158.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
156.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
155.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
152.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
152.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
151.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
151.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
149.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
149.3
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
148.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
147.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
144.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
143.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
142.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
141.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
141.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
138.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
137.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
136.1
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
134.2
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
134.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
133.6
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
133.3
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
133.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
132.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
130.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
130.1
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
130.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
129.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
129.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
129.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
128.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
128.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
126.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
125.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
124.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
123.5
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
122.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
122.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
122.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
119.8
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
119.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
119.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
118.9
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
118.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
117.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
117.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
117.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
115.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
113.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
111.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
111.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
110.7
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
110.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
109.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
109.2
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
107.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
107.4
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
107.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
105.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
105.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
105.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
104.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
104.3
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
101.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
101.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
99.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
99.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
99.4
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
98.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
98.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
98.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
97.9
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
97.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
97.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
97.3
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
96.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
94.6
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
93.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
91.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
89.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
89.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
88.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
87.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
87.8
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
87.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
87.2
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
87.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
86.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
86.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
86.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
85.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
83.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
82.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
81.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
81.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
78.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
77.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
76.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
75.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
75.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
73.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
72.5
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
72.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
70.9
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
70.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
70.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
68.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
68.0
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
60.8
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
59.2
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
57.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
54.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
53.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
52.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
47.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
37.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
168.2
Mouse sample
Sample description
nTPM
Midbrain nTPM: 168.3
Samples: 4
Max nTPM: 180.6
Min nTPM: 160.7
Sample A
Male
180.6
Sample B
Male
170.4
Sample C
Female
160.7
Sample D
Female
161.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.