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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
94.8
nTPM
HPA Brain:
303.1
nTPM
GTEx:
94.8
nTPM
FANTOM5:
464.0
Scaled Tags Per Million
Pig:
150.0
nTPM
Mouse:
275.5
nTPM
Allen mouse:
11.0
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
303.1
Sample id
Sample description
nTPM
Amygdala nTPM: 130.3
2517
Female, age 94, left hemisphere
302.7
1987
Female, age 91, left hemisphere
177.7
2514
Male, age 75, right hemisphere
123.5
2695
Female, age 67, right hemisphere
25.2
2814
Male, age 76, right hemisphere
22.2
Basal amygdala nTPM: 303.1
2243
Female, age 91, right hemisphere
460.1
2685
Female, age 94, left hemisphere
425.5
2110
Male, age 80, left hemisphere
390.9
2827
Female, age 67, right hemisphere
218.4
2609
Male, age 75, right hemisphere
176.7
1955
Male, age 76, both hemispheres
147.2
Central amygdala nTPM: 145.6
2826
Female, age 94, left hemisphere
357.4
2239
Male, age 80, left hemisphere
250.3
2515
Male, age 75, right hemisphere
65.3
2701
Female, age 91, right hemisphere
44.5
1905
Male, age 76, both hemispheres
10.4
Corticomedial amygdala nTPM: 296.1
2829
Male, age 80, left hemisphere
444.9
2242
Female, age 91, right hemisphere
388.1
2535
Female, age 67, right hemisphere
325.1
2429
Female, age 94, left hemisphere
305.4
2428
Male, age 75, right hemisphere
157.5
2240
Male, age 76, both hemispheres
156.0
Lateral amygdala nTPM: 174.6
2534
Female, age 94, left hemisphere
534.9
2256
Male, age 80, left hemisphere
175.3
2255
Female, age 91, right hemisphere
94.4
1883
Male, age 76, both hemispheres
90.3
2830
Female, age 67, right hemisphere
80.0
2516
Male, age 75, right hemisphere
72.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
94.8
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 94.8
Samples: 152
Max nTPM: 356.5
Min nTPM: 3.0
Std nTPM: 72.6
Median nTPM: 81.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
356.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
347.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
321.7
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
316.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
273.7
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
236.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
235.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
235.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
234.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
231.0
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
229.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
226.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
204.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
204.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
196.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
191.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
190.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
184.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
183.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
182.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
180.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
167.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
166.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
161.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
159.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
158.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
158.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
152.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
150.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
145.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
144.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
144.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
143.6
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
142.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
141.8
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
139.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
139.3
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
133.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
127.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
126.9
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
123.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
121.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
120.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
120.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
120.0
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
119.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
119.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
112.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
111.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
110.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
109.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
107.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
104.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
102.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
102.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
102.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
98.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
97.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
97.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
94.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
93.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
93.6
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
92.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
92.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
91.9
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
90.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
90.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
89.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
89.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
86.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
85.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
84.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
84.7
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
84.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
84.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
82.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
81.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
75.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
75.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
73.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
73.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
69.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
68.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
67.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
67.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
66.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
65.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
65.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
63.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
62.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
61.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
61.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
60.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
56.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
54.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
53.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
53.1
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
52.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
51.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
49.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
48.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
48.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
46.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
46.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
45.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
45.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
44.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
43.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
43.6
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
42.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
41.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
38.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
38.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
36.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
35.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
34.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
34.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
31.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
31.7
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
31.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
31.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
30.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
30.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
28.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
28.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
28.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
28.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
27.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
26.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
26.8
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
26.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
26.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
25.3
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
24.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
23.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
23.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
23.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
22.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
21.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
18.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
18.6
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
17.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
16.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
16.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
15.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
14.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
13.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
7.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
5.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
3.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
275.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 275.5
Samples: 4
Max nTPM: 288.4
Min nTPM: 250.7
Sample A
Male
288.4
Sample B
Male
282.1
Sample C
Female
250.7
Sample D
Female
280.7
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.