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  • SUMMARY

  • TISSUE

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  • CLSTN1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:49.7 nTPM
HPA Brain:258.7 nTPM
GTEx:49.7 nTPM
Pig:177.2 nTPM
Mouse:350.2 nTPM
Allen mouse:24.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

258.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 258.7
2226 Male, age 75, left hemisphere 323.1
1961 Female, age 42, unknown 194.3
Dorsomedial nucleus
nTPM: 230.4
1989 Male, age 62, unknown 323.4
2041 Female, age 72, unknown 186.0
2017 Female, age 42, unknown 181.9
Lateral hypothalamic area
nTPM: 228.5
2228 Male, age 66, unknown 272.1
2271 Male, age 75, both hemispheres 248.9
1791 Male, age 80, right hemisphere 243.2
2412 Male, age 62, unknown 149.9
Mammillary body
nTPM: 207.1
1923 Female, age 72, unknown 287.7
2413 Male, age 66, unknown 224.8
1945 Male, age 80, right hemisphere 190.3
1948 Female, age 72, unknown 175.5
1834 Female, age 42, unknown 157.4
Paraventricular nucleus
nTPM: 169.7
2700 Male, age 62, unknown 169.7
Preoptic area
nTPM: 199.4
1907 Male, age 80, right hemisphere 245.4
1861 Female, age 42, unknown 183.5
2414 Female, age 72, unknown 169.1
Supraoptic nucleus
nTPM: 187.9
1894 Female, age 72, unknown 203.3
2835 Female, age 72, unknown 193.2
2043 Male, age 62, unknown 167.3
Ventromedial nucleus
nTPM: 204.5
1982 Female, age 72, unknown 222.9
1822 Female, age 42, unknown 186.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.7
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 49.7
Samples: 257

Max nTPM: 213.0
Min nTPM: 7.7
Std nTPM: 23.5
Median nTPM: 46.2
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 213.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 132.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 118.2
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 105.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 104.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 99.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 98.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 94.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 94.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 94.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 93.5
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 91.8
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 91.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 86.9
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 86.6
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 83.6
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 82.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 82.3
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 82.0
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 82.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 81.1
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 80.8
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 80.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 80.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 79.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 79.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 77.8
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 77.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 76.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 75.6
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 75.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 74.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 73.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 72.6
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 71.3
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 70.9
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 70.8
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 70.7
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 70.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 70.4
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 70.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 70.0
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 69.8
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 69.4
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 69.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 69.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 68.6
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 68.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 68.2
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 68.1
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 68.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 67.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 67.2
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 67.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 66.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 66.8
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 66.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 66.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 65.9
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 65.6
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 64.5
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 64.4
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 63.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 63.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 62.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 62.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 61.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 61.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 60.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 60.7
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 60.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 60.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 60.1
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 59.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 59.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 59.2
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 59.1
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 58.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 58.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 58.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 58.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 57.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 56.4
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 56.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 56.1
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 56.0
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 55.9
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 55.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 55.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 55.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 55.2
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 55.0
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 54.6
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 54.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 54.5
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 54.4
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 54.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 54.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 54.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 53.9
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 53.8
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 53.6
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 53.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 53.0
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 52.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 52.8
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 52.6
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 52.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 51.6
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 51.5
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 51.3
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 51.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 51.0
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 50.3
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 50.1
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 50.1
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 49.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 49.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 48.9
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 48.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 48.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 48.8
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 48.6
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 48.4
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 48.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 48.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 47.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 46.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 46.2
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 45.8
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 45.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 45.1
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 45.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 44.9
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 44.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 44.6
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 44.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 44.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 44.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 44.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 43.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 43.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 43.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 42.9
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 42.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 42.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 41.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 41.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 41.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 40.9
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 40.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 40.8
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 40.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 40.6
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 40.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 40.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 39.8
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 39.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 39.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 39.2
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 38.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 38.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 38.7
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 38.7
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 38.7
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 38.3
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 38.2
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 38.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 37.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 37.8
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 37.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 37.6
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 37.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 37.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 37.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 37.2
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 37.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 36.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 36.7
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 36.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 36.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 36.2
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 35.8
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 35.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 35.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 35.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 35.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 35.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 34.7
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 34.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 34.3
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 34.2
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 33.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 33.4
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 33.2
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 33.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 33.1
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 32.9
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 32.6
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 32.5
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 32.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 31.9
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 31.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 31.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 30.9
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 30.8
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 30.7
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 30.4
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 29.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 29.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 29.1
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 29.1
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 29.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 28.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 28.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 27.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 27.7
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 27.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 27.1
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 26.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 26.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 25.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 25.8
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 25.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 25.2
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 24.9
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 24.7
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 24.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 24.4
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 24.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 23.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 23.0
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 22.9
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 22.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 22.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 22.3
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 22.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 21.7
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 21.7
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 21.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 20.5
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 20.3
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 19.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 19.2
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 19.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 18.4
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 18.4
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 17.7
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 17.0
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 16.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 16.2
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 16.1
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 14.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 13.6
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 12.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 9.7
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 7.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

177.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 177.2
Samples: 4

Max nTPM: 220.4
Min nTPM: 132.5
Sample A Female 220.4
Sample B Female 178.5
Sample C Male 177.2
Sample D Male 132.5

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

350.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 350.2
Samples: 4

Max nTPM: 369.2
Min nTPM: 331.4
Sample A Male 366.2
Sample B Male 369.2
Sample C Female 333.9
Sample D Female 331.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

24.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 24.5
68745197 Antisense, RP_050210_01_D09, Mouse strain C57BL/6J (56 days, male) 24.5
73769319 Antisense, RP_051121_04_B04, Mouse strain C57BL/6J (56 days, male) 24.4

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