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  • TISSUE

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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:79.6 nTPM
HPA Brain:49.5 nTPM
GTEx:79.6 nTPM
Pig:79.2 nTPM
Mouse:21.3 nTPM
Allen mouse:0.2 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 49.5
1961 Female, age 42, unknown 52.7
2226 Male, age 75, left hemisphere 46.3
Dorsomedial nucleus
nTPM: 33.4
2017 Female, age 42, unknown 35.7
1989 Male, age 62, unknown 32.9
2041 Female, age 72, unknown 31.7
Lateral hypothalamic area
nTPM: 33.7
1791 Male, age 80, right hemisphere 57.8
2271 Male, age 75, both hemispheres 35.1
2412 Male, age 62, unknown 26.6
2228 Male, age 66, unknown 15.5
Mammillary body
nTPM: 31.6
2413 Male, age 66, unknown 39.2
1945 Male, age 80, right hemisphere 34.9
1948 Female, age 72, unknown 33.6
1834 Female, age 42, unknown 27.1
1923 Female, age 72, unknown 23.4
Paraventricular nucleus
nTPM: 24.2
2700 Male, age 62, unknown 24.2
Preoptic area
nTPM: 42.3
1907 Male, age 80, right hemisphere 60.5
1861 Female, age 42, unknown 43.3
2414 Female, age 72, unknown 23.2
Supraoptic nucleus
nTPM: 31.3
2835 Female, age 72, unknown 36.8
1894 Female, age 72, unknown 31.2
2043 Male, age 62, unknown 26.1
Ventromedial nucleus
nTPM: 41.0
1822 Female, age 42, unknown 45.0
1982 Female, age 72, unknown 37.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 79.6
Samples: 257

Max nTPM: 526.8
Min nTPM: 13.9
Std nTPM: 54.5
Median nTPM: 64.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 526.8
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 312.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 279.1
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 237.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 232.5
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 231.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 205.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 204.6
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 197.4
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 195.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 193.3
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 192.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 185.0
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 179.2
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 174.6
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 171.8
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 170.8
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 164.1
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 161.3
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 152.2
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 150.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 149.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 148.1
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 146.5
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 146.2
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 142.1
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 141.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 139.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 137.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 134.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 131.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 131.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 129.9
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 127.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 125.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 124.8
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 123.6
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 121.6
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 120.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 116.7
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 114.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 113.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 113.8
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 113.4
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 113.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 109.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 108.1
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 108.1
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 106.9
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 104.7
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 103.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 103.6
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 102.8
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 101.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 101.4
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 100.8
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 99.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 98.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 98.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 98.3
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 97.4
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 96.9
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 96.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 96.2
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 95.9
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 93.4
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 93.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 92.9
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 92.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 91.8
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 89.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 89.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 89.6
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 89.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 88.9
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 88.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 87.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 87.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 87.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 86.6
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 86.1
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 83.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 83.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 82.5
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 82.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 81.5
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 81.3
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 81.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 80.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 80.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 80.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 79.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 79.3
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 78.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 78.8
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 78.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 78.6
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 77.3
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 76.7
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 74.5
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 73.3
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 73.3
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 73.2
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 73.1
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 73.0
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 72.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 72.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 72.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 72.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 71.8
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 71.5
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 70.7
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 70.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 69.5
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 68.8
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 68.6
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 68.0
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 68.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 67.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 67.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 67.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 67.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 66.3
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 66.0
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 65.8
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 65.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 65.5
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 64.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 64.4
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 63.8
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 63.5
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 63.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 63.2
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 63.1
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 62.7
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 62.7
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 62.6
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 61.9
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 61.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 61.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 61.1
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 60.8
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 60.6
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 59.8
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 59.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 59.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 58.9
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 58.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 58.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 58.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 57.6
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 57.5
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 57.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 56.1
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 56.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 56.0
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 55.6
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 55.6
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 55.5
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 55.3
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 55.1
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 55.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 54.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 54.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 54.3
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 53.9
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 53.6
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 53.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 53.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 52.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 52.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 51.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 51.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 50.8
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 50.6
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 50.0
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 49.8
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 49.7
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 49.6
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 49.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 48.9
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 48.9
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 48.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 48.8
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 48.7
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 48.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 48.5
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 48.2
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 48.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 48.1
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 47.6
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 47.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 47.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 47.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 46.7
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 46.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 46.3
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 46.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 46.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 45.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 45.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 45.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 45.2
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 44.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 44.2
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 44.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 43.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 43.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 43.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 41.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 41.4
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 41.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 41.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 40.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 40.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 38.7
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 38.6
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 38.1
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 38.1
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 37.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 37.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 37.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 37.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 37.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 37.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 37.2
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 37.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 37.1
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 36.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 36.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 36.4
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 36.0
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 35.1
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 34.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 34.6
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 33.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 33.1
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 32.8
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 32.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 32.3
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 32.2
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 31.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 31.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 30.9
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 29.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 29.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 27.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 26.9
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 26.3
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 26.0
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 24.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 23.7
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 22.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 22.2
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 18.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 17.3
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 13.9
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 79.2
Samples: 4

Max nTPM: 111.9
Min nTPM: 56.8
Sample A Female 79.8
Sample B Female 111.9
Sample C Male 68.3
Sample D Male 56.8

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 21.3
Samples: 4

Max nTPM: 24.4
Min nTPM: 17.5
Sample A Male 24.4
Sample B Male 20.7
Sample C Female 17.5
Sample D Female 22.4

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.2
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.2
79670592 Antisense, RP_071204_01_E01, Mouse strain C57BL/6J (56 days, male) 0.3
2298 Antisense, RP_040604_01_D02, Mouse strain C57BL/6J (56 days, male) 0.1
79556716 Antisense, RP_071204_01_E01, Mouse strain C57BL/6J (56 days, male) 0.1

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