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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
0.7
nTPM
GTEx:
0.5
nTPM
FANTOM5:
2.2
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA035596
Glial cells
Low
Neuronal cells
Not detected
HIPPOCAMPUS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.7
Sample id
Sample description
nTPM
Hippocampus nTPM: 0.7
2529
Female, age 94, left hemisphere
1.0
2148
Female, age 91, left hemisphere
0.8
1855
Male, age 76, left hemisphere
0.7
1911
Female, age 85, right hemisphere
0.7
2621
Female, age 67, right hemisphere
0.7
1898
Male, age 80, left hemisphere
0.5
HIPPOCAMPUS - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.5
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 0.5
Samples: 197
Max nTPM: 1.7
Min nTPM: 0.0
Std nTPM: 0.3
Median nTPM: 0.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
1.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
1.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
1.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
1.6
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
1.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1.4
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
1.4
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
1.3
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
1.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
1.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1.2
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
1.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
1.1
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
1.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
1.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
1.1
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
1.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
1.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1.0
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
1.0
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
1.0
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
1.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
0.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
0.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
0.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
0.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
0.8
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
0.8
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
0.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
0.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
0.8
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
0.8
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
0.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
0.8
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
0.8
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
0.8
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
0.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
0.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
0.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
0.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
0.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
0.7
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
0.7
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
0.7
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
0.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
0.7
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
0.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
0.6
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
0.6
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
0.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
0.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
0.6
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
0.6
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
0.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
0.6
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
0.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
0.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
0.6
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
0.6
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
0.6
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
0.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
0.6
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
0.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
0.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
0.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
0.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
0.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
0.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
0.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
0.5
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
0.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
0.5
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
0.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
0.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
0.5
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
0.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
0.5
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
0.5
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
0.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
0.4
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
0.4
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
0.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
0.4
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
0.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
0.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
0.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
0.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
0.4
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
0.4
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
0.4
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
0.4
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
0.4
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
0.4
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
0.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
0.4
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
0.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
0.3
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
0.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
0.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
0.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
0.3
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
0.3
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
0.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
0.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
0.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
0.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
0.3
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
0.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
0.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
0.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
0.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
0.3
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
0.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
0.3
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
0.3
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
0.3
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
0.3
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
0.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
0.3
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
0.3
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
0.3
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
0.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
0.3
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
0.3
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
0.3
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
0.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
0.3
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
0.3
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
0.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
0.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
0.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
0.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
0.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
0.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
0.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
0.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
0.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
0.2
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
0.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
0.2
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
0.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
0.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
0.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
0.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
0.2
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
0.2
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
0.2
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
0.2
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
0.2
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
0.2
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
0.2
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
0.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
0.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
0.2
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
0.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
0.2
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
0.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
0.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
0.1
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
0.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
0.1
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
0.1
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
0.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
0.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
0.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
0.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
0.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
0.1
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
0.1
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
0.1
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
0.1
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
0.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
0.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
0.1
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
0.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
0.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
0.0
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
0.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
0.0
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
0.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
0.0
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
0.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
0.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
0.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
0.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
0.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
0.0
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
0.0
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
0.0
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
0.0
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
0.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
0.0
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
0.0
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
0.0
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HIPPOCAMPUS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
