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TISSUE PRIMARY DATA SALIVARY GLAND Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Salivary gland
Tissue proteome
Salivary gland
Tissue methods
SALIVARY GLAND - Expression summary
Protein expression
Salivary glandi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glandular cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:1245.9 nTPM
HPA:1139.7 nTPM
GTEx:1245.9 nTPM
FANTOM5:1015.7 Scaled Tags Per Million
SALIVARY GLAND - SINGLE CELL RNA EXPRESSION
Explore single cell type data

SALIVARY GLAND - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Ascending and descending describe two types of gradient, based on difference in staining intensity between enterocytes in crypts and apical enterocytes.

Ascending - the staining intensity is stronger in apical enterocytes (towards the lumen) compared to enterocytes in the crypts (gland based)

Descending - the staining is weaker in apical enterocytes compared to enterocytes in crypts

Antibody HPA048746
Glandular cells Medium



SALIVARY GLAND - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.

Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1139.7
overview
Female, age 68
Salivary gland sample 216
nTPM: 1453.6
Cell types%
Glandular cells:
45

Ductal cells:
25

Adipocytes:
5

Other cell types:
25

overview
Male, age 60
Salivary gland sample 217
nTPM: 738.4
Cell types%
Glandular cells:
55

Ductal cells:
20

Adipocytes:
5

Endothelial cells:
5

Other cell types:
15

overview
Female, age 21
Salivary gland sample 218
nTPM: 1227.1
Cell types%
Glandular cells:
55

Ductal cells:
15

Adipocytes:
5

Endothelial cells:
5

Other cell types:
20


SALIVARY GLAND - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1245.9
GTEx sample id Sample description nTPM
Minor Salivary Gland
Average nTPM: 1245.9
Samples: 181

Max nTPM: 3613.0
Min nTPM: 825.1
Std nTPM: 305.3
Median nTPM: 1206.8
GTEX-1NSGN-0626-SM-E9J35 50-59 years, male 3613.0
GTEX-Y5LM-1826-SM-4VDT9 40-49 years, female 2577.1
GTEX-1KANC-1326-SM-CYPT8 50-59 years, female 2315.0
GTEX-ZLFU-2226-SM-EXUS7 40-49 years, male 2146.3
GTEX-ZT9W-2126-SM-51MSF 50-59 years, male 1875.1
GTEX-Y5V6-2226-SM-4VDTC 60-69 years, male 1771.3
GTEX-ZE7O-2926-SM-51MSG 50-59 years, female 1763.4
GTEX-1R9K4-0526-SM-E76P1 60-69 years, male 1719.4
GTEX-1R9PM-1726-SM-E76T2 20-29 years, male 1705.9
GTEX-12BJ1-2226-SM-5BC6G 60-69 years, male 1693.1
GTEX-1S5ZU-0926-SM-HPAEX 20-29 years, female 1633.3
GTEX-X3Y1-1926-SM-4PQZO 40-49 years, male 1621.9
GTEX-13QBU-2126-SM-5KLZN 40-49 years, female 1583.2
GTEX-146FR-1226-SM-5MR78 60-69 years, female 1581.6
GTEX-1LVA9-2526-SM-EVR5H 50-59 years, male 1581.6
GTEX-XGQ4-2626-SM-4AT6B 50-59 years, male 1554.7
GTEX-ZQUD-2126-SM-51MSY 30-39 years, male 1553.4
GTEX-W5X1-2426-SM-HPAGA 40-49 years, female 1551.5
GTEX-ZLWG-2026-SM-DO11F 50-59 years, female 1550.8
GTEX-14E1K-2626-SM-664OJ 50-59 years, male 1548.5
GTEX-1AMEY-1126-SM-72D79 30-39 years, female 1518.9
GTEX-Y111-2626-SM-4TT24 50-59 years, male 1508.9
GTEX-1LKK1-2926-SM-EVR4Z 50-59 years, female 1499.8
GTEX-1LVAO-2626-SM-EVR4S 60-69 years, male 1488.3
GTEX-1O97I-2826-SM-HPAEO 60-69 years, male 1482.6
GTEX-1HFI6-2826-SM-GA91I 40-49 years, male 1450.8
GTEX-1GMR2-2026-SM-7MKHK 50-59 years, male 1444.3
GTEX-1RNSC-2926-SM-EV79L 60-69 years, male 1433.6
GTEX-1KD5A-2226-SM-EV79U 50-59 years, male 1427.0
GTEX-1KD4Q-2526-SM-CXZKL 40-49 years, male 1413.4
GTEX-1MGNQ-1926-SM-DTX8L 40-49 years, male 1413.1
GTEX-1445S-2926-SM-5O993 60-69 years, male 1405.2
GTEX-18QFQ-0626-SM-718AW 30-39 years, male 1398.0
GTEX-13JVG-2926-SM-5J2N9 60-69 years, male 1395.4
GTEX-18D9U-2226-SM-7KFTN 40-49 years, male 1393.6
GTEX-1LSNL-2626-SM-EV7AT 50-59 years, male 1393.2
GTEX-1S82P-0726-SM-EVR4O 60-69 years, female 1389.2
GTEX-15RJE-2726-SM-6LPJ1 40-49 years, male 1376.5
GTEX-ZF29-2126-SM-DNZYX 60-69 years, female 1361.9
GTEX-11EMC-2526-SM-5PNVU 60-69 years, female 1360.0
GTEX-YJ8A-1826-SM-GNTAB 20-29 years, male 1355.7
GTEX-ZAB5-2326-SM-5IJFR 50-59 years, male 1345.8
GTEX-1RQED-2926-SM-HPAFT 60-69 years, male 1340.9
GTEX-1POEN-2226-SM-DPRXV 30-39 years, female 1338.0
GTEX-1192X-2926-SM-5N9BA 50-59 years, male 1334.1
GTEX-15EU6-2626-SM-7KUN4 50-59 years, male 1323.5
GTEX-1H4P4-2026-SM-9WPNV 50-59 years, male 1321.0
GTEX-11NV4-1926-SM-5N9D4 60-69 years, male 1320.1
GTEX-1HCU7-0126-SM-C1YR3 50-59 years, male 1318.2
GTEX-1ICLY-0626-SM-GA915 50-59 years, male 1308.4
GTEX-WH7G-2126-SM-4M1XU 40-49 years, male 1303.4
GTEX-X5EB-1726-SM-4E3J7 40-49 years, male 1303.0
GTEX-1339X-2326-SM-5HL5B 40-49 years, male 1301.4
GTEX-13G51-2426-SM-5LZY8 60-69 years, male 1300.6
GTEX-13111-2326-SM-5LZUQ 50-59 years, male 1298.2
GTEX-X261-2426-SM-4PQZU 50-59 years, male 1297.9
GTEX-1IDJD-2526-SM-C1YSA 30-39 years, male 1296.6
GTEX-13OVL-2926-SM-5IFG3 50-59 years, male 1296.3
GTEX-11P82-0926-SM-5986X 20-29 years, male 1296.0
GTEX-13QJC-2326-SM-5Q5CD 60-69 years, female 1296.0
GTEX-13NYB-2426-SM-5IFF4 40-49 years, male 1293.1
GTEX-1QMI2-0426-SM-EWRND 60-69 years, male 1293.1
GTEX-WOFM-2126-SM-4M9R4 20-29 years, male 1290.9
GTEX-1MCC2-2226-SM-EV7AJ 30-39 years, female 1285.0
GTEX-1I6K6-0626-SM-ARU7J 30-39 years, male 1270.4
GTEX-11P81-2026-SM-5P9GT 30-39 years, female 1269.0
GTEX-1C4CL-2026-SM-731EB 30-39 years, male 1266.4
GTEX-1AYD5-2726-SM-7MXVG 50-59 years, male 1263.2
GTEX-12WSN-2226-SM-5DUXT 40-49 years, male 1255.7
GTEX-1S5VW-1026-SM-HK797 60-69 years, male 1254.2
GTEX-ZPU1-2326-SM-57WEP 40-49 years, male 1253.9
GTEX-13OVI-2326-SM-5KM47 60-69 years, female 1253.6
GTEX-13NYC-2626-SM-5K7VN 60-69 years, male 1251.0
GTEX-ZP4G-1926-SM-57WDZ 20-29 years, female 1249.8
GTEX-1LC47-2426-SM-DHXKK 60-69 years, male 1249.3
GTEX-11ZTS-3026-SM-5EQM7 60-69 years, female 1247.0
GTEX-1NHNU-2226-SM-GRR2I 50-59 years, male 1241.8
GTEX-14PN4-2526-SM-686ZG 50-59 years, male 1239.1
GTEX-X15G-2126-SM-4PQZR 50-59 years, female 1235.6
GTEX-131XH-2626-SM-5GCNP 50-59 years, male 1235.5
GTEX-1117F-3026-SM-5GZYU 60-69 years, female 1228.0
GTEX-1JN6P-2526-SM-CNNPX 60-69 years, male 1226.6
GTEX-13VXT-1726-SM-5IFF5 20-29 years, female 1221.4
GTEX-1LVAM-0626-SM-HPAFZ 50-59 years, female 1219.2
GTEX-1IKJJ-2826-SM-GA8ZM 60-69 years, male 1219.0
GTEX-1GF9X-0226-SM-7P8SM 40-49 years, female 1218.1
GTEX-1QP9N-2026-SM-DPRZT 30-39 years, male 1217.3
GTEX-12WSL-2126-SM-5GCNG 50-59 years, male 1217.1
GTEX-15SHV-2226-SM-6M464 60-69 years, male 1215.1
GTEX-1HSMP-1926-SM-GA8Z5 70-79 years, male 1208.8
GTEX-1CB4I-2526-SM-7MKG1 50-59 years, male 1206.8
GTEX-17KNJ-2726-SM-7KFRE 50-59 years, male 1205.7
GTEX-1R9K5-0626-SM-DPRZB 50-59 years, male 1204.5
GTEX-ZC5H-2726-SM-5KLZW 40-49 years, female 1202.4
GTEX-1R9PO-2626-SM-E6CPU 60-69 years, female 1201.1
GTEX-1IOXB-2826-SM-AHZ32 50-59 years, male 1196.4
GTEX-13113-1526-SM-5EGHV 60-69 years, female 1186.2
GTEX-WYVS-2026-SM-4RGNS 40-49 years, female 1185.0
GTEX-XV7Q-2426-SM-4BRV8 40-49 years, female 1181.9
GTEX-YF7O-2226-SM-5CVN8 50-59 years, male 1179.4
GTEX-1HFI7-2426-SM-B2LXV 50-59 years, female 1177.6
GTEX-WHSB-2326-SM-4M1XK 50-59 years, male 1171.2
GTEX-ZA64-1726-SM-5CVMF 20-29 years, male 1170.5
GTEX-145ME-1626-SM-5RQI3 40-49 years, female 1169.0
GTEX-1MCQQ-2226-SM-DLHC4 60-69 years, male 1164.8
GTEX-1GN1V-2926-SM-9JGI3 60-69 years, male 1157.6
GTEX-1JN1M-2426-SM-ARU93 60-69 years, female 1155.8
GTEX-1LH75-2726-SM-HL11E 50-59 years, female 1153.4
GTEX-1GZ2Q-2526-SM-9KNVW 40-49 years, male 1152.1
GTEX-WY7C-1426-SM-4OND1 50-59 years, male 1151.1
GTEX-1C6VR-0726-SM-7P8OV 60-69 years, male 1148.1
GTEX-1IY9M-2926-SM-A96TH 60-69 years, male 1142.6
GTEX-1OJC3-1026-SM-E6CQK 20-29 years, male 1136.1
GTEX-YB5K-1726-SM-5IFIZ 40-49 years, female 1132.8
GTEX-1QCLZ-2526-SM-EXUST 60-69 years, female 1131.7
GTEX-18A7B-2826-SM-7KFTK 70-79 years, male 1126.2
GTEX-18A67-0626-SM-7KFSL 50-59 years, male 1122.5
GTEX-1HGF4-2326-SM-GA91Q 60-69 years, male 1122.4
GTEX-1S83E-0626-SM-E9TKC 40-49 years, male 1115.9
GTEX-1LBAC-0626-SM-D3L9T 20-29 years, male 1115.2
GTEX-1J8QM-1826-SM-A96TA 60-69 years, female 1113.6
GTEX-1I1HK-2526-SM-A96SM 60-69 years, male 1109.5
GTEX-1I6K7-0926-SM-A96SV 40-49 years, male 1106.5
GTEX-111FC-2926-SM-5GZY7 60-69 years, male 1103.1
GTEX-1B8KZ-1726-SM-73KV7 50-59 years, male 1098.2
GTEX-14B4R-1426-SM-5Q5CG 30-39 years, male 1096.7
GTEX-1OJC4-3126-SM-EXOJK 50-59 years, female 1096.3
GTEX-1GPI7-0326-SM-7MKH6 20-29 years, male 1092.8
GTEX-1314G-2026-SM-5LZUM 30-39 years, male 1091.0
GTEX-11TUW-2426-SM-5EQKB 60-69 years, male 1086.5
GTEX-1PDJ9-2126-SM-HPAFH 20-29 years, male 1086.3
GTEX-11EQ9-2026-SM-5P9JI 30-39 years, male 1084.5
GTEX-1I4MK-1326-SM-B2LWT 50-59 years, female 1083.4
GTEX-15SDE-1226-SM-HAV36 50-59 years, female 1079.2
GTEX-1C64O-0626-SM-7DHL1 60-69 years, male 1070.9
GTEX-1PIEJ-0626-SM-DTX99 20-29 years, female 1069.8
GTEX-XMK1-2626-SM-4B65R 40-49 years, male 1069.5
GTEX-WFJO-2026-SM-4LVM3 30-39 years, male 1066.5
GTEX-1B8SF-1826-SM-731DJ 60-69 years, male 1064.8
GTEX-1J1R8-1826-SM-AHZ3B 40-49 years, male 1056.0
GTEX-1HSMQ-0926-SM-A96SI 50-59 years, male 1054.4
GTEX-1QP28-2026-SM-F2I3M 50-59 years, female 1053.0
GTEX-1P4AB-2926-SM-EXOJR 50-59 years, male 1049.7
GTEX-11WQK-2926-SM-5EQKT 50-59 years, male 1046.1
GTEX-1QEPI-0626-SM-E76QE 60-69 years, female 1045.2
GTEX-12WSM-1826-SM-5BC64 60-69 years, male 1030.0
GTEX-1J8EW-2826-SM-A96T9 60-69 years, female 1029.7
GTEX-1A3MV-1726-SM-72D68 30-39 years, male 1026.6
GTEX-1HSGN-0626-SM-A9G2E 40-49 years, female 1022.2
GTEX-1GTWX-2526-SM-9JGHG 60-69 years, male 1018.8
GTEX-ZG7Y-2426-SM-DO11H 50-59 years, male 1014.6
GTEX-1AX8Z-0626-SM-731EH 60-69 years, male 1012.0
GTEX-1HR9M-2526-SM-A9G3J 60-69 years, male 1010.4
GTEX-14PJ3-1526-SM-664O9 50-59 years, male 1004.6
GTEX-1GN1W-2526-SM-9JGHX 50-59 years, female 1001.6
GTEX-13OVK-1826-SM-6PALE 40-49 years, male 999.1
GTEX-131XF-2826-SM-5EGKH 60-69 years, male 997.6
GTEX-11ZTT-2226-SM-5CVLP 60-69 years, female 995.0
GTEX-13CF2-2426-SM-5LZYL 60-69 years, male 991.6
GTEX-Y3I4-1926-SM-4TT8L 50-59 years, male 986.0
GTEX-14JIY-3026-SM-6EU1R 60-69 years, male 982.2
GTEX-14PJN-1726-SM-69LO7 30-39 years, male 974.9
GTEX-1H1CY-2326-SM-9OSXW 60-69 years, female 974.5
GTEX-15CHC-1226-SM-686ZH 60-69 years, female 968.6
GTEX-Z9EW-1426-SM-HPAG9 40-49 years, male 968.5
GTEX-1EH9U-2926-SM-7DHLX 60-69 years, male 964.8
GTEX-1HSEH-1826-SM-A96SA 60-69 years, male 964.1
GTEX-13O21-1926-SM-5MR39 50-59 years, male 960.1
GTEX-17MFQ-1626-SM-7938Z 20-29 years, male 958.9
GTEX-1B97J-2126-SM-79OL6 50-59 years, female 948.6
GTEX-1IE54-0826-SM-AHZ2Z 40-49 years, female 927.5
GTEX-1IDJC-1626-SM-AHZ2R 50-59 years, male 925.2
GTEX-ZXG5-2826-SM-5NQ8T 60-69 years, male 922.8
GTEX-1JKYR-0726-SM-AHZ3K 20-29 years, male 914.2
GTEX-1B932-0626-SM-731EM 40-49 years, female 879.2
GTEX-1RAZA-0626-SM-EAZ4H 20-29 years, male 872.1
GTEX-1C64N-2926-SM-79OLM 50-59 years, male 861.1
GTEX-1PPH8-1526-SM-E6CQO 20-29 years, male 859.2
GTEX-1AX9K-2126-SM-72D7K 50-59 years, male 858.3
GTEX-1IDJV-2326-SM-GA8ZL 60-69 years, male 837.6
GTEX-178AV-1426-SM-6LLID 40-49 years, male 825.1
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SALIVARY GLAND - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1015.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Parotid gland
Scaled Tags Per Million: 1015.7
FF:10199-103F1 23 years, male 1015.7
Salivary gland
Scaled Tags Per Million: 843.3
FF:10093-102C3 16-60 years, mixed 843.3
Submaxillary gland
Scaled Tags Per Million: 567.3
FF:10202-103F4 24 years, male 567.3

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