We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
34.7
nTPM
HPA Brain:
40.9
nTPM
GTEx:
34.7
nTPM
FANTOM5:
49.8
Scaled Tags Per Million
Pig:
28.4
nTPM
Mouse:
20.0
nTPM
Allen mouse:
8.8
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
40.9
Sample id
Sample description
nTPM
Amygdala nTPM: 24.9
2517
Female, age 94, left hemisphere
37.8
2514
Male, age 75, right hemisphere
27.3
1987
Female, age 91, left hemisphere
26.0
2814
Male, age 76, right hemisphere
17.0
2695
Female, age 67, right hemisphere
16.3
Basal amygdala nTPM: 34.7
2827
Female, age 67, right hemisphere
59.9
2685
Female, age 94, left hemisphere
41.6
2243
Female, age 91, right hemisphere
38.3
2609
Male, age 75, right hemisphere
31.9
2110
Male, age 80, left hemisphere
19.3
1955
Male, age 76, both hemispheres
17.4
Central amygdala nTPM: 39.7
2826
Female, age 94, left hemisphere
80.1
2239
Male, age 80, left hemisphere
38.5
2515
Male, age 75, right hemisphere
35.5
2701
Female, age 91, right hemisphere
31.0
1905
Male, age 76, both hemispheres
13.4
Corticomedial amygdala nTPM: 32.9
2429
Female, age 94, left hemisphere
70.5
2535
Female, age 67, right hemisphere
43.3
2428
Male, age 75, right hemisphere
25.9
2829
Male, age 80, left hemisphere
23.2
2242
Female, age 91, right hemisphere
18.2
2240
Male, age 76, both hemispheres
16.2
Lateral amygdala nTPM: 40.9
2830
Female, age 67, right hemisphere
68.4
2516
Male, age 75, right hemisphere
49.7
2255
Female, age 91, right hemisphere
42.4
2534
Female, age 94, left hemisphere
42.2
2256
Male, age 80, left hemisphere
22.3
1883
Male, age 76, both hemispheres
20.1
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
34.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 34.7
Samples: 152
Max nTPM: 99.6
Min nTPM: 5.7
Std nTPM: 18.0
Median nTPM: 29.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
99.6
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
83.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
80.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
78.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
78.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
76.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
73.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
73.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
72.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
71.7
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
71.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
69.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
65.7
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
63.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
60.9
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
59.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
58.5
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
58.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
57.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
57.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
55.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
54.1
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
53.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
53.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
52.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
51.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
51.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
50.8
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
50.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
49.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
49.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
48.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
48.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
48.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
44.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
44.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
43.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
43.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
43.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
42.8
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
41.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
40.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
40.3
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
39.6
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
39.4
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
39.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
39.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
37.9
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
37.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
36.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
36.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
36.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
35.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
35.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
34.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
34.8
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
34.6
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
34.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
34.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
33.3
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
33.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
33.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
32.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
32.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
31.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
30.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
30.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
30.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
30.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
30.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
29.8
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
29.7
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
29.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
29.4
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
29.1
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
29.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
28.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
28.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
28.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
28.3
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
28.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
27.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
26.8
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
26.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
25.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
25.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
25.3
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
25.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
25.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
25.1
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
24.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
24.8
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
24.7
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
24.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
24.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
24.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
23.8
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
23.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
23.6
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
23.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
23.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
23.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
23.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
23.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
22.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
22.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
22.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
22.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
22.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
21.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
21.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
21.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
21.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
21.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
21.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
21.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
20.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
20.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
20.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
20.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
19.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
19.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
19.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
19.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
18.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
18.8
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
18.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
17.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
17.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
17.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
16.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
15.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
15.2
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
14.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
14.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
14.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
13.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
13.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
12.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
12.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
12.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
11.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
11.4
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
11.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
10.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
9.7
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
5.7
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
20.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 20.0
Samples: 4
Max nTPM: 22.2
Min nTPM: 18.4
Sample A
Male
19.0
Sample B
Male
20.4
Sample C
Female
22.2
Sample D
Female
18.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
