PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:82.7 nTPM
FANTOM5:74.9 Scaled Tags Per Million
Pig:436.9 nTPM
Mouse:4.9 nTPM
Allen mouse:4.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 82.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 65.2
2090 Male, age 80, both hemispheres 69.1
2188 Female, age 91, both hemispheres 64.3
2301 Female, age 85, both hemispheres 64.2
1984 Male, age 76, both hemispheres 63.3
Area postrema
nTPM: 72.6
2799 Male, age 61, both hemispheres 81.6
2306 Male, age 80, both hemispheres 71.5
2054 Male, age 76, both hemispheres 64.6
Dorsal cochlear nucleus
nTPM: 69.5
2370 Male, age 61, both hemispheres 75.6
2802 Male, age 74, right hemisphere 71.9
2058 Male, age 76, both hemispheres 69.1
2187 Female, age 91, both hemispheres 66.8
2378 Male, age 80, both hemispheres 64.4
Dorsal medullary reticular nucleus
nTPM: 66.3
2040 Female, age 85, both hemispheres 75.4
2373 Male, age 61, both hemispheres 63.4
2088 Male, age 76, both hemispheres 60.1
Dorsal motor vagal complex
nTPM: 73.4
2000 Male, age 74, unknown 90.5
2133 Female, age 91, both hemispheres 84.9
2844 Male, age 55, unknown 81.6
2797 Male, age 61, both hemispheres 80.0
2643 Male, age 74, both hemispheres 68.9
2185 Male, age 76, both hemispheres 64.3
2813 Female, age 72, unknown 63.8
2807 Female, age 85, both hemispheres 53.5
Dorsal tegmental nucleus
nTPM: 69.3
2083 Male, age 80, both hemispheres 77.5
2358 Male, age 61, both hemispheres 71.3
2326 Male, age 74, both hemispheres 67.3
1936 Male, age 76, left hemisphere 61.0
Dorsolateral tegmental area
nTPM: 71.6
2337 Male, age 61, both hemispheres 88.3
2654 Male, age 80, both hemispheres 73.4
2751 Female, age 85, both hemispheres 67.5
2360 Male, age 74, both hemispheres 67.2
2141 Male, age 76, both hemispheres 61.6
Gigantocellular reticular nuclei, medullary
nTPM: 67.1
2314 Male, age 61, both hemispheres 79.7
2462 Male, age 74, both hemispheres 70.5
2387 Female, age 91, both hemispheres 65.7
2310 Male, age 80, both hemispheres 63.7
1876 Female, age 85, both hemispheres 62.4
2022 Male, age 76, right hemisphere 60.8
Gigantocellular reticular nuclei, pars
nTPM: 64.3
2168 Male, age 76, both hemispheres 77.0
2336 Male, age 61, both hemispheres 66.1
2084 Female, age 85, both hemispheres 65.9
2706 Male, age 80, both hemispheres 57.5
2330 Male, age 80, both hemispheres 55.0
Inferior olive
nTPM: 82.7
2563 Male, age 74, both hemispheres 97.6
2085 Female, age 85, both hemispheres 94.1
2178 Male, age 61, both hemispheres 75.4
2379 Male, age 80, both hemispheres 73.4
2628 Female, age 91, both hemispheres 73.0
Kolliker-Fuse nucleus
nTPM: 73.0
2163 Male, age 80, both hemispheres 82.2
2315 Male, age 76, right hemisphere 70.9
2793 Female, age 91, left hemisphere 66.0
Lateral lemniscal nuclei
nTPM: 63.4
2169 Male, age 76, both hemispheres 76.4
2036 Male, age 80, both hemispheres 65.3
2746 Female, age 85, left hemisphere 62.0
2320 Female, age 91, left hemisphere 56.6
2453 Male, age 74, right hemisphere 56.5
Lateral medullary reticular nucleus
nTPM: 77.9
2044 Male, age 76, both hemispheres 80.9
2305 Male, age 74, both hemispheres 80.7
2804 Female, age 91, both hemispheres 78.8
2852 Male, age 80, both hemispheres 77.6
2190 Female, age 85, both hemispheres 76.2
2374 Male, age 61, both hemispheres 73.0
Lateral parabrachial nucleus
nTPM: 71.4
2139 Female, age 85, right hemisphere 77.8
2013 Male, age 80, both hemispheres 73.5
2790 Male, age 61, both hemispheres 67.4
2792 Male, age 76, both hemispheres 66.7
Lateral vestibular nucleus
nTPM: 81.5
2184 Male, age 76, both hemispheres 86.4
2311 Male, age 80, both hemispheres 76.6
Locus coeruleus
nTPM: 77.4
2123 Female, age 91, both hemispheres 97.7
2014 Male, age 55, unknown 86.0
1980 Male, age 76, both hemispheres 76.0
2162 Male, age 80, both hemispheres 75.3
2720 Male, age 74, both hemispheres 75.3
2317 Female, age 72, unknown 72.2
2788 Male, age 74, unknown 59.0
Medial olivary nucleus
nTPM: 75.3
1943 Male, age 61, both hemispheres 79.3
1962 Male, age 76, both hemispheres 77.1
2138 Female, age 91, both hemispheres 76.8
2851 Male, age 80, both hemispheres 68.0
Medial parabrachial nucleus
nTPM: 67.1
2170 Female, age 91, both hemispheres 75.3
2156 Male, age 61, both hemispheres 72.3
2463 Female, age 85, right hemisphere 63.6
2786 Male, age 76, both hemispheres 62.4
2854 Male, age 80, both hemispheres 61.7
Medial periolivary nuclei
nTPM: 67.2
2063 Male, age 76, both hemispheres 83.4
2171 Female, age 85, both hemispheres 73.0
2081 Male, age 80, both hemispheres 61.9
2791 Male, age 74, right hemisphere 61.5
2458 Female, age 91, both hemispheres 55.9
Medial vestibular nucleus
nTPM: 78.5
2624 Male, age 61, both hemispheres 85.7
2134 Male, age 76, both hemispheres 85.1
2743 Female, age 85, both hemispheres 76.9
2801 Male, age 74, both hemispheres 76.8
2803 Female, age 91, both hemispheres 74.9
2093 Male, age 80, both hemispheres 71.8
Motor facial nucleus
nTPM: 68.2
2062 Male, age 76, both hemispheres 90.0
2365 Male, age 74, right hemisphere 70.3
2126 Male, age 61, both hemispheres 66.9
2795 Female, age 91, both hemispheres 63.6
2697 Female, age 85, both hemispheres 63.1
2327 Male, age 80, both hemispheres 55.3
Motor hypoglossal nucleus
nTPM: 70.9
2125 Female, age 91, both hemispheres 84.3
2132 Female, age 85, both hemispheres 81.3
2182 Male, age 80, both hemispheres 76.4
2277 Male, age 76, both hemispheres 61.8
2461 Male, age 61, both hemispheres 50.5
Motor trigeminal nucleus
nTPM: 64.2
2560 Male, age 74, both hemispheres 72.2
2309 Male, age 76, both hemispheres 64.0
2335 Male, age 61, both hemispheres 63.5
2079 Male, age 80, both hemispheres 62.7
2321 Female, age 91, both hemispheres 58.7
Nuclei of the trapezoid body
nTPM: 70.9
1983 Male, age 76, both hemispheres 89.6
2159 Male, age 61, both hemispheres 74.9
2735 Female, age 85, both hemispheres 69.5
2166 Male, age 80, both hemispheres 62.3
2368 Female, age 91, both hemispheres 58.3
Nucleus ambiguus
nTPM: 74.7
2071 Male, age 76, both hemispheres 79.7
2096 Female, age 85, both hemispheres 69.6
Nucleus cuneatus
nTPM: 68.7
2564 Male, age 74, both hemispheres 80.5
2131 Male, age 76, both hemispheres 75.8
2808 Female, age 85, both hemispheres 69.3
2100 Male, age 76, both hemispheres 69.1
2376 Male, age 61, both hemispheres 69.1
2380 Male, age 80, both hemispheres 68.5
2562 Male, age 61, both hemispheres 67.2
2381 Male, age 80, both hemispheres 63.8
2805 Female, age 91, both hemispheres 55.2
Nucleus gracilis
nTPM: 72.0
2627 Male, age 74, both hemispheres 81.0
2382 Male, age 80, both hemispheres 67.8
2299 Female, age 85, both hemispheres 67.1
Nucleus raphe magnus
nTPM: 70.9
2160 Male, age 61, both hemispheres 84.8
2455 Male, age 74, both hemispheres 74.0
2051 Male, age 76, both hemispheres 72.6
2172 Female, age 85, both hemispheres 72.3
2328 Male, age 80, both hemispheres 61.8
2459 Female, age 91, both hemispheres 59.7
Nucleus raphe obscurus
nTPM: 77.0
2845 Female, age 85, midline 82.8
2800 Male, age 61, midline 80.0
2142 Male, age 76, midline 68.2
Nucleus raphe pallidus
nTPM: 80.4
1924 Male, age 61, midline 91.9
2183 Male, age 80, midline 82.5
2145 Male, age 76, midline 66.8
Nucleus tractus solitarii
nTPM: 66.1
2191 Female, age 85, both hemispheres 79.4
2656 Male, age 76, both hemispheres 71.6
2144 Female, age 91, right hemisphere 57.7
2307 Male, age 80, both hemispheres 55.7
Paramedian reticular nucleus
nTPM: 70.5
2057 Male, age 80, both hemispheres 73.9
2050 Female, age 85, both hemispheres 73.6
2313 Male, age 61, both hemispheres 69.4
2052 Male, age 76, both hemispheres 65.2
Parvicellular reticular nuclei
nTPM: 64.5
2119 Male, age 80, both hemispheres 69.1
2095 Male, age 76, both hemispheres 68.2
2558 Male, age 74, both hemispheres 56.1
Parvicellular reticular nuclei, medullary
nTPM: 74.8
2091 Female, age 85, both hemispheres 78.9
2189 Female, age 91, both hemispheres 74.5
2181 Male, age 80, left hemisphere 70.9
Pedunculopontine tegmental nucleus
nTPM: 64.9
2334 Male, age 80, both hemispheres 72.6
2338 Male, age 61, both hemispheres 65.5
1921 Female, age 85, both hemispheres 56.7
Peritrigeminal nucleus
nTPM: 81.9
2067 Female, age 85, both hemispheres 91.5
2136 Male, age 76, both hemispheres 83.2
2179 Male, age 61, both hemispheres 70.9
Pontine nuclei
nTPM: 76.7
1863 Male, age 55, unknown 89.8
2787 Female, age 85, both hemispheres 86.8
2727 Male, age 61, right hemisphere 81.0
1968 Male, age 76, left hemisphere 78.2
2109 Female, age 72, unknown 75.9
2454 Male, age 74, left hemisphere 74.9
2115 Male, age 80, left hemisphere 65.7
2319 Female, age 91, both hemispheres 61.3
Pontine raphe nucleus
nTPM: 68.6
2122 Female, age 85, midline 70.4
2853 Male, age 76, midline 66.9
Posteroventral cochlear nucleus
nTPM: 69.5
2371 Male, age 61, both hemispheres 73.8
2070 Male, age 76, both hemispheres 72.6
2341 Male, age 80, both hemispheres 70.2
2752 Female, age 85, both hemispheres 70.1
2135 Female, age 91, both hemispheres 60.8
Prepositus hypoglossal nucleus
nTPM: 72.4
2855 Female, age 85, right hemisphere 78.6
2086 Male, age 80, both hemispheres 66.1
Principal sensory trigeminal nucleus
nTPM: 68.4
2324 Male, age 76, both hemispheres 81.8
2158 Male, age 61, both hemispheres 72.5
2367 Female, age 91, left hemisphere 60.1
2008 Male, age 80, left hemisphere 59.3
Reticular pontine nucleus, caudal
nTPM: 68.4
2092 Male, age 76, both hemispheres 78.4
2559 Male, age 74, both hemispheres 73.7
2457 Female, age 91, both hemispheres 64.9
2332 Male, age 80, right hemisphere 56.8
Reticular pontine nucleus, oral
nTPM: 71.5
2361 Male, age 74, both hemispheres 95.1
1939 Male, age 80, both hemispheres 67.5
2012 Female, age 85, both hemispheres 67.0
2167 Male, age 76, both hemispheres 66.2
2366 Female, age 91, both hemispheres 61.6
Reticulotegmental nucleus
nTPM: 66.8
2452 Male, age 74, both hemispheres 71.0
2333 Male, age 80, both hemispheres 66.6
2325 Male, age 76, both hemispheres 65.2
2322 Female, age 91, both hemispheres 64.5
Spinal trigeminal nucleus, caudal
nTPM: 74.7
2390 Female, age 91, both hemispheres 84.3
2447 Male, age 76, both hemispheres 79.5
2312 Male, age 61, both hemispheres 71.5
2642 Male, age 74, both hemispheres 69.9
2308 Male, age 80, both hemispheres 68.4
Spinal trigeminal nucleus, interpolar
nTPM: 76.7
2625 Male, age 61, both hemispheres 95.6
2066 Male, age 76, right hemisphere 81.7
2033 Male, age 80, both hemispheres 74.7
2386 Female, age 85, both hemispheres 67.2
2389 Female, age 91, both hemispheres 64.6
Spinal trigeminal nucleus, oral
nTPM: 69.3
2164 Male, age 80, both hemispheres 70.4
2737 Female, age 85, both hemispheres 70.3
1978 Male, age 76, both hemispheres 67.2
Spinal vestibular nucleus
nTPM: 75.9
2186 Female, age 91, both hemispheres 78.7
2748 Male, age 76, both hemispheres 77.3
2780 Male, age 80, both hemispheres 75.6
2796 Male, age 61, both hemispheres 75.4
2384 Male, age 74, both hemispheres 74.8
2806 Female, age 85, both hemispheres 73.8
Subcoeruleus area
nTPM: 67.0
2369 Female, age 85, left hemisphere 70.1
2451 Male, age 74, both hemispheres 69.5
2323 Female, age 91, left hemisphere 69.3
1958 Male, age 80, both hemispheres 68.8
2089 Male, age 76, left hemisphere 57.5
Superior olive
nTPM: 65.0
2364 Male, age 74, right hemisphere 68.4
1875 Female, age 85, both hemispheres 66.4
2020 Male, age 76, both hemispheres 65.5
2561 Female, age 91, both hemispheres 62.3
2329 Male, age 80, right hemisphere 62.1
Superior vestibular nucleus
nTPM: 74.7
2015 Male, age 80, both hemispheres 79.6
2383 Male, age 74, both hemispheres 74.0
2061 Male, age 76, both hemispheres 70.5
Ventral medullary reticular nucleus
nTPM: 73.4
2372 Male, age 61, both hemispheres 76.6
2060 Male, age 76, both hemispheres 70.3
Ventral periolivary nuclei
nTPM: 63.3
2023 Male, age 76, both hemispheres 68.3
2165 Male, age 80, both hemispheres 66.7
2130 Female, age 85, both hemispheres 66.3
2794 Female, age 91, left hemisphere 51.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 75.9
2302 Female, age 91, both hemispheres 80.9
2741 Female, age 85, both hemispheres 80.5
1986 Male, age 76, both hemispheres 76.0
2180 Male, age 61, both hemispheres 74.3
2118 Male, age 80, both hemispheres 67.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 66.7
2449 Male, age 74, both hemispheres 70.9
2161 Male, age 80, both hemispheres 67.8
2359 Male, age 61, both hemispheres 66.9
2840 Female, age 85, both hemispheres 66.0
1959 Male, age 76, both hemispheres 65.5
2456 Female, age 91, both hemispheres 63.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 74.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 74.9
FF:10182-103D2 60 years, female 77.9
FF:10165-103B3 76 years, female 72.0
Medulla oblongata
Scaled Tags Per Million: 74.6
FF:10174-103C3 60 years, female 98.4
FF:10155-103A2 76 years, female 63.8
FF:10038-101F2 18-64 years, mixed 61.6
Pons
Scaled Tags Per Million: 60.8
FF:10033-101E6 18-54 years, mixed 60.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 436.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 398.0
Samples: 4

Max nTPM: 490.3
Min nTPM: 335.1
Sample A Female 350.3
Sample B Female 335.1
Sample C Male 416.1
Sample D Male 490.3
Pons
nTPM: 436.9
Samples: 4

Max nTPM: 494.3
Min nTPM: 313.8
Sample A Female 480.6
Sample B Female 313.8
Sample C Male 458.8
Sample D Male 494.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 4.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 5.0
Samples: 4

Max nTPM: 5.9
Min nTPM: 4.1
Sample A Male 5.9
Sample B Male 4.1
Sample C Female 5.7
Sample D Female 4.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.8
69059832 Antisense, RP_050317_04_B07, Mouse strain C57BL/6J (56 days, male) 4.8
Pons
Expression energy: 3.2
69059832 Antisense, RP_050317_04_B07, Mouse strain C57BL/6J (56 days, male) 3.2

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