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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.5
nTPM
HPA Brain:
28.3
nTPM
GTEx:
49.5
nTPM
FANTOM5:
31.9
Scaled Tags Per Million
Pig:
8.4
nTPM
MIDBRAIN - Annotated protein expression
Pending normal tissue analysis
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
28.3
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 22.5
2219
Male, age 76, both hemispheres
26.1
2586
Male, age 75, left hemisphere
26.0
2411
Female, age 72, unknown
24.9
2666
Male, age 74, left hemisphere
23.7
2828
Female, age 72, unknown
22.7
1827
Male, age 72, unknown
22.1
1870
Female, age 42, unknown
21.0
1830
Male, age 51, unknown
20.3
2019
Male, age 18, unknown
20.0
1833
Male, age 53, unknown
18.4
Dorsal raphe nucleus nTPM: 21.9
2298
Female, age 72, unknown
24.2
1828
Male, age 53, unknown
22.6
2047
Male, age 72, unknown
21.7
2750
Male, age 76, both hemispheres
20.6
2016
Female, age 72, unknown
20.3
Inferior colliculus nTPM: 20.0
1848
Female, age 42, unknown
21.5
2097
Female, age 72, unknown
21.4
1890
Male, age 53, unknown
19.5
2849
Male, age 72, unknown
17.7
Median raphe nucleus nTPM: 19.2
2220
Male, age 76, midline
19.2
Periaquaductal grey, anterior nTPM: 28.3
1947
Male, age 18, unknown
35.2
2502
Female, age 75, unknown
27.2
1795
Male, age 51, unknown
22.4
Periaquaductal grey, dorsal nTPM: 19.2
1840
Male, age 53, unknown
21.9
2850
Male, age 76, both hemispheres
19.8
1831
Male, age 72, unknown
18.2
2464
Female, age 72, unknown
16.7
Periaquaductal grey, lateral nTPM: 17.0
2140
Male, age 76, both hemispheres
18.4
2053
Male, age 18, unknown
17.7
2272
Male, age 74, both hemispheres
15.0
Pretectal area nTPM: 20.8
2007
Male, age 72, unknown
26.0
1816
Male, age 51, unknown
24.9
1817
Female, age 42, unknown
24.0
2316
Male, age 76, right hemisphere
22.3
1944
Female, age 72, unknown
21.7
2667
Female, age 75, unknown
19.7
2825
Male, age 18, unknown
19.6
1815
Male, age 53, unknown
18.8
2224
Female, age 72, unknown
18.8
2273
Male, age 74, both hemispheres
17.5
2407
Male, age 75, both hemispheres
15.2
Red nucleus nTPM: 22.8
2725
Female, age 75, unknown
27.2
1821
Female, age 72, unknown
26.5
2227
Male, age 72, unknown
24.3
2769
Male, age 72, unknown
23.6
2588
Male, age 74, left hemisphere
23.3
1865
Male, age 51, unknown
23.1
2503
Female, age 72, unknown
22.5
1904
Male, age 53, unknown
21.6
1954
Female, age 42, unknown
21.5
2823
Male, age 76, right hemisphere
21.2
2785
Male, age 18, unknown
20.8
2584
Male, age 75, left hemisphere
18.0
Substantia nigra nTPM: 24.6
1916
Female, age 42, unknown
35.2
1851
Male, age 51, unknown
32.5
1941
Male, age 53, unknown
29.0
2665
Male, age 74, both hemispheres
25.3
2409
Female, age 72, unknown
23.4
2699
Male, age 18, unknown
22.9
1889
Female, age 72, unknown
22.1
2241
Male, age 72, unknown
21.1
2583
Male, age 75, right hemisphere
18.0
2590
Female, age 75, unknown
16.2
Superior colliculus nTPM: 21.0
2668
Female, age 75, unknown
27.2
1796
Male, age 53, unknown
21.9
2587
Male, age 74, left hemisphere
21.4
2261
Male, age 18, unknown
21.1
1895
Male, age 76, right hemisphere
20.9
1995
Male, age 72, unknown
20.2
2664
Male, age 75, both hemispheres
19.6
2087
Female, age 72, unknown
19.5
1913
Female, age 42, unknown
19.1
1839
Male, age 51, unknown
18.7
Ventral tegmental area nTPM: 24.8
1915
Female, age 42, unknown
29.6
2410
Female, age 72, unknown
28.1
2218
Male, age 76, both hemispheres
23.8
2021
Male, age 53, unknown
23.2
1942
Male, age 51, unknown
22.5
2223
Female, age 72, unknown
21.6
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
49.5
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 49.5
Samples: 139
Max nTPM: 95.9
Min nTPM: 23.6
Std nTPM: 12.9
Median nTPM: 47.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
95.9
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
94.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
90.3
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
88.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
84.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
81.7
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
74.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
73.0
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
70.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
68.4
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
67.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
66.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
66.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
64.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
64.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
63.6
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
62.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
62.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
61.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
60.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
59.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
59.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
58.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
58.3
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
58.2
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
57.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
57.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
57.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
57.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
57.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
57.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
56.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
56.5
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
56.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
55.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
55.3
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
54.8
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
54.5
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
54.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
54.3
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
54.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
54.2
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
53.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
53.1
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
53.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
52.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
52.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
52.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
52.5
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
52.3
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
52.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
51.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
51.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
51.0
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
50.3
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
50.2
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
50.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
50.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
49.8
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
49.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
49.6
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
49.5
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
49.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
49.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
48.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
48.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
48.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
47.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
47.8
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
47.6
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
47.5
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
47.4
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
47.2
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
47.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
47.0
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
47.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
46.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
46.7
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
46.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
46.6
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
46.5
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
45.8
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
45.6
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
45.4
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
45.2
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
45.1
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
44.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
44.8
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
44.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
44.5
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
44.0
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
43.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
43.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
42.9
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
42.9
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
42.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
42.9
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
42.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
42.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
42.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
42.2
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
42.2
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
42.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
41.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
41.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
41.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
40.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
39.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
39.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
38.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
38.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
38.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
38.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
38.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
38.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
37.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
37.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
36.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
36.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
36.5
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
36.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
36.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
35.8
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
35.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
35.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
35.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
35.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
35.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
33.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
33.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
33.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
33.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
32.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
30.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
30.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
29.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
28.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
26.6
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
23.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.