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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
47.7
nTPM
HPA Brain:
17.4
nTPM
GTEx:
47.7
nTPM
FANTOM5:
30.3
Scaled Tags Per Million
Pig:
5.8
nTPM
Mouse:
30.7
nTPM
Allen mouse:
0.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
17.4
Sample id
Sample description
nTPM
Amygdala nTPM: 14.9
1987
Female, age 91, left hemisphere
19.5
2517
Female, age 94, left hemisphere
16.6
2514
Male, age 75, right hemisphere
14.1
2814
Male, age 76, right hemisphere
13.0
2695
Female, age 67, right hemisphere
11.4
Basal amygdala nTPM: 16.9
2110
Male, age 80, left hemisphere
19.7
2243
Female, age 91, right hemisphere
18.9
1955
Male, age 76, both hemispheres
17.9
2685
Female, age 94, left hemisphere
16.4
2827
Female, age 67, right hemisphere
16.3
2609
Male, age 75, right hemisphere
12.4
Central amygdala nTPM: 15.3
2826
Female, age 94, left hemisphere
20.3
2239
Male, age 80, left hemisphere
16.2
1905
Male, age 76, both hemispheres
14.2
2515
Male, age 75, right hemisphere
13.1
2701
Female, age 91, right hemisphere
12.6
Corticomedial amygdala nTPM: 17.4
2829
Male, age 80, left hemisphere
22.6
2429
Female, age 94, left hemisphere
18.6
2242
Female, age 91, right hemisphere
18.0
2428
Male, age 75, right hemisphere
15.6
2535
Female, age 67, right hemisphere
14.8
2240
Male, age 76, both hemispheres
14.7
Lateral amygdala nTPM: 15.8
2534
Female, age 94, left hemisphere
21.5
2256
Male, age 80, left hemisphere
19.4
1883
Male, age 76, both hemispheres
16.6
2516
Male, age 75, right hemisphere
14.4
2255
Female, age 91, right hemisphere
12.2
2830
Female, age 67, right hemisphere
10.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
47.7
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 47.7
Samples: 152
Max nTPM: 162.8
Min nTPM: 19.6
Std nTPM: 23.4
Median nTPM: 40.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
162.8
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
160.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
140.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
119.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
89.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
87.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
87.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
85.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
82.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
82.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
81.8
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
80.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
79.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
79.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
79.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
79.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
78.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
73.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
73.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
71.3
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
71.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
69.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
69.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
66.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
66.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
65.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
63.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
62.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
62.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
60.5
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
60.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
60.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
60.1
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
59.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
59.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
57.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
57.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
57.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
56.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
56.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
55.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
55.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
53.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
53.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
53.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
52.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
52.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
51.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
50.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
50.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
49.7
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
49.1
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
48.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
48.3
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
47.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
47.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
46.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
46.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
46.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
46.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
45.6
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
45.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
45.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
45.1
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
44.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
44.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
44.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
43.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
43.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
42.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
41.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
41.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
41.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
41.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
40.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
40.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
40.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
39.6
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
39.6
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
39.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
39.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
39.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
39.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
39.0
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
38.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
38.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
38.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
38.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
38.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
38.1
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
36.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
36.7
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
36.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
36.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
35.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
35.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
35.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
35.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
34.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
34.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
34.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
34.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
34.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
33.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
33.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
33.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
33.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
32.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
32.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
32.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
31.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
31.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
31.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
30.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
30.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
30.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
30.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
30.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
30.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
30.0
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
29.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
29.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
29.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
28.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
28.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
28.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
28.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
28.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
28.3
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
28.2
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
27.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
27.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
27.5
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
27.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
27.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
27.2
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
27.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
25.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
25.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
25.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
25.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
24.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
24.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
24.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
22.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
21.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
20.9
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
19.6
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
30.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 30.7
Samples: 4
Max nTPM: 37.1
Min nTPM: 26.3
Sample A
Male
30.0
Sample B
Male
26.3
Sample C
Female
37.1
Sample D
Female
29.2
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.