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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
150.2
nTPM
GTEx:
150.2
nTPM
FANTOM5:
68.8
Scaled Tags Per Million
Pig:
166.7
nTPM
Mouse:
178.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
150.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 150.2
Samples: 105
Max nTPM: 238.8
Min nTPM: 80.9
Std nTPM: 36.1
Median nTPM:
491_1
89 years, female
238.8
490_1
67 years, female
237.8
413_1
59 years, female
236.4
415_1
77 years, female
232.3
149_1
88 years, male
231.2
414_1
84 years, female
224.5
162_1
79 years, female
224.2
43_1
64 years, female
222.6
315_1
62 years, female
204.7
32_1
67 years, male
201.3
2_1
77 years, female
196.1
466_1
57 years, female
195.3
324_1
76 years, male
194.0
217_1
76 years, male
193.4
89_1
63 years, male
192.6
139_1
64 years, female
187.7
126_1
63 years, male
186.8
153_1
70 years, female
185.6
495_1
57 years, female
185.4
307_1
66 years, female
184.8
142_1
61 years, female
184.0
265_1
87 years, male
183.1
266_1
85 years, male
179.1
81_1
67 years, male
176.8
518_1
75 years, female
171.8
117_1
61 years, male
171.6
501_1
88 years, male
171.3
246_1
77 years, male
170.9
145_1
84 years, male
168.2
396_1
62 years, male
166.0
468_1
89 years, male
165.4
314_1
67 years, male
163.6
313_1
79 years, female
162.5
6_1
73 years, female
162.1
447_1
81 years, male
161.6
288_1
66 years, female
160.9
17_1
71 years, male
159.3
251_1
78 years, male
158.6
322_1
76 years, male
158.5
316_1
62 years, male
157.4
254_1
77 years, female
157.2
229_1
69 years, female
156.9
348_1
84 years, male
156.2
35_1
74 years, female
154.7
18_1
88 years, male
151.0
115_1
83 years, male
151.0
311_1
78 years, male
150.7
109_1
81 years, female
150.6
499_1
55 years, female
149.4
9_1
66 years, female
147.0
404_1
82 years, female
146.3
376_1
75 years, female
146.1
526_1
61 years, male
144.6
389_1
86 years, female
144.0
386_1
76 years, male
143.7
137_1
83 years, male
141.2
480_1
63 years, male
140.4
503_1
68 years, male
139.7
291_1
76 years, male
138.6
120_1
70 years, female
138.4
377_1
82 years, female
137.7
41_1
94 years, female
137.6
189_1
76 years, male
137.5
375_1
74 years, female
137.1
354_1
81 years, female
135.9
292_1
71 years, male
133.2
172_1
72 years, female
132.9
384_1
83 years, male
132.9
319_1
81 years, male
132.6
293_1
68 years, female
131.8
425_1
59 years, female
131.3
405_1
91 years, male
131.2
321_1
62 years, female
131.0
379_1
60 years, male
128.9
286_1
68 years, female
126.2
4_1
88 years, female
125.9
264_1
73 years, female
125.5
177_1
74 years, male
123.3
243_1
75 years, male
122.1
517_1
88 years, male
121.9
308_1
70 years, female
121.1
335_1
73 years, female
120.5
406_1
79 years, male
119.7
320_1
89 years, female
114.2
237_1
82 years, male
113.7
318_1
68 years, male
113.7
119_1
70 years, female
113.3
506_1
65 years, male
112.7
42_1
85 years, male
111.7
352_1
62 years, male
111.6
452_1
88 years, female
110.9
394_1
75 years, female
110.5
347_1
72 years, male
110.3
351_1
91 years, male
110.3
353_1
82 years, female
110.2
163_1
78 years, male
109.5
355_1
70 years, female
105.4
349_1
83 years, male
104.8
356_1
87 years, female
102.7
295_1
61 years, female
102.4
218_1
71 years, female
102.1
317_1
60 years, male
97.3
350_1
84 years, female
93.1
173_1
67 years, male
92.2
99_1
64 years, male
80.9
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
