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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
72.4
nTPM
HPA Brain:
91.8
nTPM
GTEx:
72.4
nTPM
FANTOM5:
123.4
Scaled Tags Per Million
Pig:
161.8
nTPM
Mouse:
165.0
nTPM
Allen mouse:
4.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
91.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 72.9
2219
Male, age 76, both hemispheres
83.5
1870
Female, age 42, unknown
83.4
1827
Male, age 72, unknown
79.1
1833
Male, age 53, unknown
78.8
1830
Male, age 51, unknown
75.7
2411
Female, age 72, unknown
74.7
2666
Male, age 74, left hemisphere
69.3
2019
Male, age 18, unknown
63.8
2828
Female, age 72, unknown
62.4
2586
Male, age 75, left hemisphere
58.4
Dorsal raphe nucleus nTPM: 71.1
2750
Male, age 76, both hemispheres
79.7
1828
Male, age 53, unknown
71.3
2016
Female, age 72, unknown
70.9
2047
Male, age 72, unknown
66.9
2298
Female, age 72, unknown
66.9
Inferior colliculus nTPM: 84.2
2849
Male, age 72, unknown
99.9
2097
Female, age 72, unknown
83.6
1848
Female, age 42, unknown
81.1
1890
Male, age 53, unknown
72.1
Median raphe nucleus nTPM: 91.8
2220
Male, age 76, midline
91.8
Periaquaductal grey, anterior nTPM: 75.3
1947
Male, age 18, unknown
80.2
2502
Female, age 75, unknown
76.4
1795
Male, age 51, unknown
69.2
Periaquaductal grey, dorsal nTPM: 84.4
2850
Male, age 76, both hemispheres
101.6
1840
Male, age 53, unknown
83.5
1831
Male, age 72, unknown
77.7
2464
Female, age 72, unknown
74.7
Periaquaductal grey, lateral nTPM: 77.5
2140
Male, age 76, both hemispheres
83.8
2272
Male, age 74, both hemispheres
76.5
2053
Male, age 18, unknown
72.2
Pretectal area nTPM: 78.9
2224
Female, age 72, unknown
82.8
1816
Male, age 51, unknown
82.7
2273
Male, age 74, both hemispheres
82.1
1944
Female, age 72, unknown
81.1
2825
Male, age 18, unknown
80.1
1815
Male, age 53, unknown
79.9
1817
Female, age 42, unknown
79.3
2667
Female, age 75, unknown
77.5
2407
Male, age 75, both hemispheres
74.6
2007
Male, age 72, unknown
74.3
2316
Male, age 76, right hemisphere
73.6
Red nucleus nTPM: 70.5
2725
Female, age 75, unknown
79.1
1821
Female, age 72, unknown
78.2
2503
Female, age 72, unknown
77.4
1954
Female, age 42, unknown
73.7
2823
Male, age 76, right hemisphere
72.0
2227
Male, age 72, unknown
70.5
1865
Male, age 51, unknown
69.7
2785
Male, age 18, unknown
67.9
2769
Male, age 72, unknown
67.6
1904
Male, age 53, unknown
66.9
2584
Male, age 75, left hemisphere
64.5
2588
Male, age 74, left hemisphere
58.9
Substantia nigra nTPM: 70.8
1941
Male, age 53, unknown
83.9
2241
Male, age 72, unknown
80.6
2699
Male, age 18, unknown
79.5
1889
Female, age 72, unknown
77.3
2409
Female, age 72, unknown
72.6
1916
Female, age 42, unknown
67.7
1851
Male, age 51, unknown
64.7
2665
Male, age 74, both hemispheres
62.4
2590
Female, age 75, unknown
60.3
2583
Male, age 75, right hemisphere
59.0
Superior colliculus nTPM: 74.8
1895
Male, age 76, right hemisphere
87.0
2587
Male, age 74, left hemisphere
81.7
1839
Male, age 51, unknown
78.2
2668
Female, age 75, unknown
77.1
2261
Male, age 18, unknown
76.3
1913
Female, age 42, unknown
76.0
1796
Male, age 53, unknown
72.8
2087
Female, age 72, unknown
70.5
2664
Male, age 75, both hemispheres
65.6
1995
Male, age 72, unknown
62.6
Ventral tegmental area nTPM: 74.5
2223
Female, age 72, unknown
84.6
2218
Male, age 76, both hemispheres
78.3
1942
Male, age 51, unknown
76.6
2021
Male, age 53, unknown
70.2
2410
Female, age 72, unknown
68.9
1915
Female, age 42, unknown
68.3
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
72.4
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 72.4
Samples: 139
Max nTPM: 120.6
Min nTPM: 49.7
Std nTPM: 11.3
Median nTPM: 72.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
120.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
119.1
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
100.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
95.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
94.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
93.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
92.8
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
90.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
89.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
89.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
88.2
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
87.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
85.8
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
85.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
84.8
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
83.9
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
83.6
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
82.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
82.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
81.9
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
81.9
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
80.8
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
80.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
80.4
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
80.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
80.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
79.7
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
79.6
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
79.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
78.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
78.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
78.2
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
78.0
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
77.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
77.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
77.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
77.4
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
77.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
77.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
77.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
76.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
76.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
76.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
75.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
75.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
75.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
75.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
75.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
75.5
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
75.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
75.4
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
75.1
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
75.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
74.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
74.9
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
74.5
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
74.4
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
74.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
74.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
74.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
73.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
73.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
73.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
73.3
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
73.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
72.9
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
72.7
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
72.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
72.4
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
72.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
72.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
72.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
71.9
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
71.6
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
71.4
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
71.3
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
71.2
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
70.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
70.4
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
70.3
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
70.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
69.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
69.9
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
69.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
68.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
68.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
68.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
68.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
67.7
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
67.7
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
67.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
67.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
67.0
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
66.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
66.4
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
66.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
66.4
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
66.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
66.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
65.7
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
65.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
65.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
64.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
64.7
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
64.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
64.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
64.1
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
63.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
63.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
63.7
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
63.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
63.4
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
63.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
63.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
63.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
62.9
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
62.2
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
62.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
61.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
61.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
61.2
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
60.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
60.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
60.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
59.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
59.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
59.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
59.2
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
58.3
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
57.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
56.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
56.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
55.8
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
55.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
52.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
51.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
50.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
50.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
49.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
165.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 165.0
Samples: 4
Max nTPM: 177.2
Min nTPM: 157.5
Sample A
Male
157.5
Sample B
Male
166.2
Sample C
Female
177.2
Sample D
Female
159.1
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.