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  • TISSUE

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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:103.8 nTPM
HPA Brain:223.1 nTPM
GTEx:103.8 nTPM
Pig:85.5 nTPM
Mouse:61.0 nTPM
Allen mouse:1.9 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

223.1
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 132.5
1961 Female, age 42, unknown 134.9
2226 Male, age 75, left hemisphere 130.1
Dorsomedial nucleus
nTPM: 155.1
1989 Male, age 62, unknown 184.4
2041 Female, age 72, unknown 148.6
2017 Female, age 42, unknown 132.2
Lateral hypothalamic area
nTPM: 119.8
1791 Male, age 80, right hemisphere 194.7
2412 Male, age 62, unknown 119.9
2271 Male, age 75, both hemispheres 88.5
2228 Male, age 66, unknown 75.9
Mammillary body
nTPM: 108.3
1945 Male, age 80, right hemisphere 173.0
1834 Female, age 42, unknown 110.0
2413 Male, age 66, unknown 95.4
1948 Female, age 72, unknown 87.9
1923 Female, age 72, unknown 75.0
Paraventricular nucleus
nTPM: 117.4
2700 Male, age 62, unknown 117.4
Preoptic area
nTPM: 181.6
1861 Female, age 42, unknown 203.9
2414 Female, age 72, unknown 179.0
1907 Male, age 80, right hemisphere 161.7
Supraoptic nucleus
nTPM: 223.1
1894 Female, age 72, unknown 281.0
2043 Male, age 62, unknown 233.4
2835 Female, age 72, unknown 155.0
Ventromedial nucleus
nTPM: 162.7
1982 Female, age 72, unknown 173.7
1822 Female, age 42, unknown 151.8

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 103.8
Samples: 257

Max nTPM: 412.7
Min nTPM: 14.3
Std nTPM: 59.1
Median nTPM: 85.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 412.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 322.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 315.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 307.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 298.6
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 292.5
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 263.4
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 249.6
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 245.1
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 239.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 224.3
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 214.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 210.8
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 197.3
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 197.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 195.4
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 193.0
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 193.0
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 192.4
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 190.8
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 188.3
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 183.6
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 183.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 180.4
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 179.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 176.2
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 175.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 174.4
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 171.5
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 170.7
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 169.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 167.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 166.4
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 165.3
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 162.1
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 161.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 161.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 160.2
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 160.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 158.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 158.2
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 157.5
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 156.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 156.0
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 154.8
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 154.2
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 152.3
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 152.0
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 150.4
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 148.3
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 144.8
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 142.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 142.0
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 141.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 139.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 138.7
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 137.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 137.1
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 136.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 135.5
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 135.2
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 134.7
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 133.7
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 133.5
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 130.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 129.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 129.5
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 129.5
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 128.9
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 128.7
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 128.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 128.0
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 125.8
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 124.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 124.1
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 124.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 123.9
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 120.5
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 119.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 119.4
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 119.1
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 118.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 118.8
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 117.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 115.9
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 113.9
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 113.7
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 112.3
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 111.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 111.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 111.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 110.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 110.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 110.1
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 108.7
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 105.8
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 104.2
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 104.1
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 103.8
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 103.8
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 103.8
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 100.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 99.9
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 99.7
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 99.0
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 98.9
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 98.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 98.3
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 97.3
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 96.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 96.6
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 95.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 95.5
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 93.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 92.1
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 91.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 90.0
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 89.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 89.7
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 89.2
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 88.4
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 88.2
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 88.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 87.5
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 86.5
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 86.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 85.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 85.5
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 85.3
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 84.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 84.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 84.3
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 84.2
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 83.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 83.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 83.4
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 83.3
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 83.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 82.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 82.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 82.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 82.0
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 81.3
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 81.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 81.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 80.5
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 80.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 80.2
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 80.1
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 80.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 79.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 79.6
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 79.0
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 79.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 78.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 78.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 77.7
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 77.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 76.4
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 75.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 74.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 74.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 74.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 74.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 74.2
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 74.1
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 74.0
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 73.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 73.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 73.7
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 73.6
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 72.8
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 72.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 72.4
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 72.0
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 72.0
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 72.0
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 71.9
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 71.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 71.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 71.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 70.3
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 69.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 69.7
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 69.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 69.0
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 68.8
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 68.6
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 67.5
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 66.8
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 66.3
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 66.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 65.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 65.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 65.5
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 65.4
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 64.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 64.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 64.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 62.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 62.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 61.8
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 61.4
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 61.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 61.2
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 60.8
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 59.1
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 59.1
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 58.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 57.7
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 56.0
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 55.9
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 55.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 55.4
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 55.3
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 55.2
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 54.7
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 54.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 53.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 53.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 52.8
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 51.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 49.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 49.3
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 49.2
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 48.1
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 47.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 47.0
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 46.9
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 45.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 45.0
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 43.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 43.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 43.5
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 43.3
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 43.1
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 43.0
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 42.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 42.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 42.7
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 41.8
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 39.5
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 39.2
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 38.6
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 38.3
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 34.8
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 32.6
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 32.5
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 28.3
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 25.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 23.2
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 22.7
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 22.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 20.5
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 18.3
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 18.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 14.3
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

85.5
Pig sample Sample description nTPM
Hypothalamus
nTPM: 85.6
Samples: 4

Max nTPM: 96.8
Min nTPM: 58.1
Sample A Female 96.8
Sample B Female 94.0
Sample C Male 93.3
Sample D Male 58.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.0
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 61.0
Samples: 4

Max nTPM: 71.1
Min nTPM: 54.3
Sample A Male 54.3
Sample B Male 57.7
Sample C Female 71.1
Sample D Female 61.0

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 1.9
75079777 Antisense, RP_060412_02_F06, Mouse strain C57BL/6J (56 days, male) 1.9
75694250 Antisense, RP_060412_02_F06, Mouse strain C57BL/6J (56 days, male) 1.6

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