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TISSUE HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE
MIDBRAIN OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:64.8 nTPM
HPA Brain:64.7 nTPM
GTEx:64.8 nTPM
Pig:246.7 nTPM
Mouse:124.2 nTPM
Allen mouse:6.4 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - Annotated protein expression
Pending normal tissue analysis

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.7
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 42.7
2226 Male, age 75, left hemisphere 44.8
1961 Female, age 42, unknown 40.6
Dorsomedial nucleus
nTPM: 42.5
1989 Male, age 62, unknown 48.8
2017 Female, age 42, unknown 40.0
2041 Female, age 72, unknown 38.9
Lateral hypothalamic area
nTPM: 54.7
1791 Male, age 80, right hemisphere 58.2
2412 Male, age 62, unknown 54.9
2271 Male, age 75, both hemispheres 53.8
2228 Male, age 66, unknown 52.0
Mammillary body
nTPM: 51.5
2413 Male, age 66, unknown 59.2
1945 Male, age 80, right hemisphere 50.9
1923 Female, age 72, unknown 50.3
1834 Female, age 42, unknown 50.2
1948 Female, age 72, unknown 46.6
Paraventricular nucleus
nTPM: 47.4
2700 Male, age 62, unknown 47.4
Preoptic area
nTPM: 47.8
1861 Female, age 42, unknown 49.3
2414 Female, age 72, unknown 47.1
1907 Male, age 80, right hemisphere 47.0
Supraoptic nucleus
nTPM: 64.7
2835 Female, age 72, unknown 71.7
2043 Male, age 62, unknown 62.4
1894 Female, age 72, unknown 60.1
Ventromedial nucleus
nTPM: 43.7
1982 Female, age 72, unknown 47.0
1822 Female, age 42, unknown 40.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 64.8
Samples: 257

Max nTPM: 241.5
Min nTPM: 36.2
Std nTPM: 19.1
Median nTPM: 60.8
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 241.5
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 136.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 124.7
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 121.4
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 102.3
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 101.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 99.9
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 99.8
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 98.6
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 98.1
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 96.6
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 95.7
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 94.0
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 92.4
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 92.1
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 91.4
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 91.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 90.1
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 87.2
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 86.9
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 86.9
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 86.6
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 86.5
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 85.1
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 84.8
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 84.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 84.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 83.5
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 83.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 83.4
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 82.8
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 82.6
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 82.2
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 82.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 81.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 81.2
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 80.3
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 80.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 79.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 79.4
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 79.2
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 79.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 79.1
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 78.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 78.0
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 78.0
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 77.6
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 77.5
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 76.9
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 76.9
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 76.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 76.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 75.7
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 75.1
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 75.0
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 74.6
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 74.4
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 74.4
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 74.3
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 74.2
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 74.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 74.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 73.9
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 73.8
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 73.7
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 73.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 73.3
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 72.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 72.4
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 72.4
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 72.4
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 71.8
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 71.7
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 71.6
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 71.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 71.1
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 70.6
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 70.6
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 70.4
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 70.3
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 70.3
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 70.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 70.1
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 70.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 69.9
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 69.5
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 69.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 68.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 68.9
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 68.6
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 68.6
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 68.5
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 68.3
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 68.2
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 67.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 67.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 67.4
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 67.4
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 67.1
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 67.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 66.9
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 66.7
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 66.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 66.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 66.2
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 66.1
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 66.0
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 65.7
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 65.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 65.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 65.4
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 65.3
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 65.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 65.1
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 65.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 64.7
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 64.6
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 64.6
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 64.0
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 63.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 63.1
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 63.0
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 62.5
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 62.5
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 62.0
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 61.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 61.6
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 61.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 60.8
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 60.7
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 60.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 60.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 59.7
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 59.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 59.4
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 59.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 59.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 59.4
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 59.0
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 58.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 58.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 58.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 58.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 58.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 58.4
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 58.4
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 58.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 57.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 57.5
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 57.3
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 57.2
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 57.2
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 57.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 57.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 57.1
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 57.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 56.9
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 56.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 56.4
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 56.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 56.3
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 55.9
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 55.8
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 55.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 55.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 55.6
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 55.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 55.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 54.8
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 54.5
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 54.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 54.3
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 54.2
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 54.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 54.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 54.1
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 54.0
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 53.9
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 53.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 53.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 53.5
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 53.3
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 52.9
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 52.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 52.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 52.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 52.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 52.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 52.5
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 52.5
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 52.5
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 52.5
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 52.4
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 52.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 52.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 52.3
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 52.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 52.1
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 52.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 51.8
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 51.7
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 51.7
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 51.3
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 51.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 51.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 51.2
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 51.1
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 51.1
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 51.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 50.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 50.6
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 50.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 50.3
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 50.2
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 50.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 49.9
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 49.8
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 49.5
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 49.2
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 48.8
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 48.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 48.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 48.5
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 48.5
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 48.4
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 48.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 48.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 47.6
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 47.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 47.3
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 47.3
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 47.1
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 47.0
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 46.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 46.9
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 46.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 46.6
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 46.3
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 46.1
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 46.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 45.9
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 45.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 44.9
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 44.8
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 44.7
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 44.4
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 44.4
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 43.5
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 43.2
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 43.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 42.8
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 42.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 41.4
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 39.3
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 39.0
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 37.6
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 36.2
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.7
Pig sample Sample description nTPM
Hypothalamus
nTPM: 246.7
Samples: 4

Max nTPM: 287.4
Min nTPM: 184.3
Sample A Female 287.4
Sample B Female 258.0
Sample C Male 257.0
Sample D Male 184.3

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.2
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 124.2
Samples: 4

Max nTPM: 127.0
Min nTPM: 120.8
Sample A Male 120.8
Sample B Male 127.0
Sample C Female 126.5
Sample D Female 122.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.4
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 6.4
121097 Antisense, RP_040507_01_A03, Mouse strain C57BL/6J (56 days, male) 9.3
76081939 Antisense, RP_060626_01_B02, Mouse strain C57BL/6J (56 days, male) 5.7
77620333 Antisense, RP_070205_01_B07, Mouse strain C57BL/6J (56 days, male) 4.3
77869814 Antisense, RP_070205_01_B07, Mouse strain C57BL/6J (56 days, male) 1.5

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