HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:12.8 nTPM
HPA Brain:66.7 nTPM
GTEx:12.8 nTPM
FANTOM5:140.8 Scaled Tags Per Million
Pig:103.2 nTPM
Mouse:17.7 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035232Antibody HPA043190
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 66.7
Sample id Sample description nTPM
Hippocampus
nTPM: 57.9
1911 Female, age 85, right hemisphere 75.8
2529 Female, age 94, left hemisphere 66.2
1898 Male, age 80, left hemisphere 53.9
1855 Male, age 76, left hemisphere 52.7
2148 Female, age 91, left hemisphere 49.5
2621 Female, age 67, right hemisphere 49.4
Dentate gyrus
nTPM: 52.4
2528 Male, age 74, both hemispheres 64.4
2010 Male, age 76, both hemispheres 61.4
2246 Female, age 85, both hemispheres 54.4
2530 Female, age 94, left hemisphere 51.1
1927 Female, age 91, both hemispheres 45.8
2531 Female, age 67, both hemispheres 37.5
Entorhinal gyrus
nTPM: 50.9
2117 Female, age 91, right hemisphere 77.8
1938 Female, age 85, left hemisphere 56.0
2764 Male, age 80, right hemisphere 46.5
1787 Male, age 76, left hemisphere 46.1
2686 Male, age 75, right hemisphere 43.0
2613 Female, age 94, left hemisphere 36.2
Hippocampus, CA1
nTPM: 49.8
1873 Female, age 85, both hemispheres 63.8
2527 Male, age 74, both hemispheres 60.2
2082 Female, age 91, right hemisphere 57.0
2045 Male, age 76, both hemispheres 37.2
2749 Male, age 80, left hemisphere 30.9
Hippocampus, CA2
nTPM: 55.1
2113 Female, age 91, right hemisphere 68.6
1963 Male, age 80, left hemisphere 61.8
2249 Male, age 74, both hemispheres 61.7
1940 Female, age 85, left hemisphere 57.9
2437 Female, age 94, left hemisphere 46.4
1892 Male, age 76, both hemispheres 34.0
Hippocampus, CA3
nTPM: 46.9
1891 Female, age 85, both hemispheres 81.2
2436 Male, age 74, both hemispheres 48.5
1867 Male, age 76, both hemispheres 43.6
2620 Female, age 94, left hemisphere 42.1
2861 Female, age 67, both hemispheres 36.7
2137 Male, age 80, left hemisphere 29.1
Parahippocampal cortex
nTPM: 51.5
2692 Male, age 74, both hemispheres 64.5
1933 Female, age 85, both hemispheres 57.4
2250 Female, age 67, right hemisphere 56.9
2018 Male, age 76, both hemispheres 56.0
1990 Female, age 91, right hemisphere 55.5
2532 Female, age 72, left hemisphere 48.1
2245 Female, age 91, both hemispheres 47.9
1850 Male, age 80, both hemispheres 46.6
2622 Female, age 67, right hemisphere 41.5
2693 Female, age 94, both hemispheres 40.3
Perirhinal gyrus
nTPM: 40.5
1847 Female, age 91, left hemisphere 43.8
1841 Female, age 85, right hemisphere 42.7
2521 Female, age 94, right hemisphere 39.8
1794 Male, age 80, right hemisphere 38.1
2848 Male, age 76, right hemisphere 38.1
Subiculum
nTPM: 66.7
2042 Male, age 76, both hemispheres 75.5
1901 Male, age 80, both hemispheres 72.6
1977 Female, age 85, both hemispheres 65.7
2729 Female, age 91, right hemisphere 65.3
2438 Female, age 94, left hemisphere 61.7
2619 Male, age 74, both hemispheres 59.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 36.4
Min nTPM: 2.2
Std nTPM: 6.1
Median nTPM: 11.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 36.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 33.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 27.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 27.4
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 27.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 27.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 25.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 24.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 140.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 140.8
FF:10153-102I9 76 years, female 176.7
FF:10169-103B7 60 years, female 104.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 103.2
Pig sample Sample description nTPM
Subiculum
nTPM: 103.2
Samples: 4

Max nTPM: 116.1
Min nTPM: 91.6
Sample A Female 116.1
Sample B Female 106.0
Sample C Male 91.6
Sample D Male 99.1
Dorsal hippocampus
nTPM: 86.6
Samples: 4

Max nTPM: 97.9
Min nTPM: 70.5
Sample A Female 97.1
Sample B Female 81.0
Sample C Male 97.9
Sample D Male 70.5
Entorhinal cortex
nTPM: 77.4
Samples: 4

Max nTPM: 95.5
Min nTPM: 61.1
Sample A Female 61.1
Sample B Female 82.1
Sample C Male 95.5
Sample D Male 70.7
Ventral hippocampus
nTPM: 83.7
Samples: 4

Max nTPM: 96.9
Min nTPM: 75.5
Sample A Female 83.8
Sample B Female 96.9
Sample C Male 78.7
Sample D Male 75.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 19.0
Min nTPM: 16.0
Sample A Male 19.0
Sample B Male 16.8
Sample C Female 18.9
Sample D Female 16.0
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.8
Sample A Male 20.3
Sample B Male 16.7
Sample C Female 15.8
Sample D Female 17.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71147771 Antisense, RP_050719_02_C05, Mouse strain C57BL/6J (56 days, male) 0.1
71493135 Antisense, RP_050913_02_C04, Mouse strain C57BL/6J (56 days, male) 0.0

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