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  • TISSUE

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  • ATP5PF
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:246.4 nTPM
HPA Brain:107.9 nTPM
GTEx:246.4 nTPM
Pig:41.4 nTPM
Mouse:285.3 nTPM
Allen mouse:0.5 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

107.9
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 81.7
2226 Male, age 75, left hemisphere 105.5
1961 Female, age 42, unknown 57.8
Dorsomedial nucleus
nTPM: 67.2
1989 Male, age 62, unknown 86.3
2041 Female, age 72, unknown 59.7
2017 Female, age 42, unknown 55.7
Lateral hypothalamic area
nTPM: 88.2
2228 Male, age 66, unknown 118.5
1791 Male, age 80, right hemisphere 88.3
2271 Male, age 75, both hemispheres 79.9
2412 Male, age 62, unknown 66.0
Mammillary body
nTPM: 107.9
1923 Female, age 72, unknown 156.5
1948 Female, age 72, unknown 110.3
2413 Male, age 66, unknown 103.5
1945 Male, age 80, right hemisphere 90.2
1834 Female, age 42, unknown 78.8
Paraventricular nucleus
nTPM: 72.9
2700 Male, age 62, unknown 72.9
Preoptic area
nTPM: 76.5
1907 Male, age 80, right hemisphere 80.5
1861 Female, age 42, unknown 74.8
2414 Female, age 72, unknown 74.2
Supraoptic nucleus
nTPM: 85.3
1894 Female, age 72, unknown 102.1
2835 Female, age 72, unknown 80.5
2043 Male, age 62, unknown 73.4
Ventromedial nucleus
nTPM: 62.3
1982 Female, age 72, unknown 76.0
1822 Female, age 42, unknown 48.5

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.4
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 246.4
Samples: 257

Max nTPM: 582.5
Min nTPM: 152.4
Std nTPM: 64.9
Median nTPM: 235.9
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 582.5
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 477.0
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 455.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 442.4
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 419.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 414.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 412.8
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 409.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 407.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 404.4
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 398.7
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 394.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 391.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 386.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 379.8
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 376.7
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 369.3
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 365.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 364.8
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 364.7
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 350.6
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 350.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 345.6
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 343.9
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 341.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 330.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 326.7
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 321.5
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 318.0
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 314.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 314.0
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 312.8
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 312.2
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 310.6
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 307.3
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 305.7
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 304.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 301.3
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 296.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 296.4
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 294.6
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 291.6
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 291.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 288.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 286.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 283.9
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 283.8
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 283.5
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 283.4
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 281.9
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 281.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 279.7
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 279.6
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 279.3
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 278.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 278.0
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 276.6
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 275.4
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 275.4
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 275.0
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 274.4
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 274.1
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 273.8
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 272.6
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 272.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 272.3
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 272.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 271.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 271.1
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 270.7
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 268.9
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 268.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 268.7
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 267.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 267.0
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 265.9
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 265.6
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 265.5
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 264.8
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 264.0
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 263.4
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 262.4
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 260.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 259.8
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 259.3
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 258.2
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 258.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 257.8
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 257.3
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 257.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 256.7
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 256.5
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 256.4
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 255.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 254.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 253.0
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 252.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 252.2
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 252.2
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 249.6
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 249.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 249.2
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 249.2
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 249.0
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 248.7
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 247.9
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 247.0
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 247.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 246.2
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 245.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 245.3
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 244.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 243.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 242.4
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 241.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 241.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 241.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 240.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 240.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 240.3
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 239.4
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 239.3
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 238.7
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 238.6
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 237.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 236.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 236.1
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 235.9
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 235.9
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 235.4
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 233.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 232.7
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 232.5
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 231.3
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 230.1
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 229.8
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 228.7
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 228.5
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 227.8
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 227.2
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 226.3
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 226.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 225.6
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 225.5
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 225.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 224.7
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 222.7
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 222.4
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 222.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 221.9
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 221.6
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 221.5
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 220.1
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 219.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 219.3
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 219.0
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 218.6
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 218.6
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 218.4
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 218.0
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 216.5
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 216.4
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 216.3
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 215.7
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 214.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 213.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 212.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 211.7
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 211.6
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 210.9
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 210.6
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 210.5
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 210.0
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 208.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 208.6
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 208.4
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 208.2
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 207.1
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 206.3
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 205.8
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 204.2
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 203.2
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 202.8
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 202.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 202.2
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 201.6
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 201.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 201.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 201.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 200.8
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 200.8
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 200.6
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 200.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 200.4
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 200.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 198.4
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 198.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 198.1
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 198.0
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 198.0
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 197.7
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 196.7
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 196.4
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 194.9
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 194.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 194.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 194.4
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 194.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 193.6
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 193.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 191.4
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 191.2
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 190.6
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 190.3
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 189.9
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 189.4
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 188.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 188.2
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 187.9
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 186.8
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 186.2
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 185.8
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 184.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 184.7
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 184.6
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 184.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 183.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 180.5
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 180.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 179.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 179.7
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 177.7
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 177.3
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 176.8
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 176.3
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 175.7
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 175.7
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 175.2
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 175.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 173.5
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 173.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 173.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 172.9
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 172.4
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 169.7
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 169.5
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 169.0
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 168.6
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 168.2
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 168.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 167.3
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 165.8
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 163.8
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 159.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 159.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 152.9
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 152.4
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 41.4
Samples: 4

Max nTPM: 54.5
Min nTPM: 29.1
Sample A Female 54.5
Sample B Female 44.1
Sample C Male 38.0
Sample D Male 29.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

285.3
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 285.3
Samples: 4

Max nTPM: 317.7
Min nTPM: 273.2
Sample A Male 274.4
Sample B Male 317.7
Sample C Female 273.2
Sample D Female 275.8

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 0.5
124 Antisense, RP_Baylor_102641, Mouse strain C57BL/6J (56 days, male) 0.5
125 Antisense, RP_Baylor_102641, Mouse strain C57BL/6J (56 days, male) 0.1

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