HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:530.0 nTPM
HPA Brain:367.2 nTPM
GTEx:530.0 nTPM
FANTOM5:334.5 Scaled Tags Per Million
Pig:179.4 nTPM
Mouse:264.7 nTPM
Allen mouse:7.6 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058951Antibody HPA065649
Glial cells HighHigh
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 367.2
Sample id Sample description nTPM
Hippocampus
nTPM: 266.1
2621 Female, age 67, right hemisphere 309.9
1898 Male, age 80, left hemisphere 294.5
2529 Female, age 94, left hemisphere 291.6
2148 Female, age 91, left hemisphere 252.9
1911 Female, age 85, right hemisphere 249.8
1855 Male, age 76, left hemisphere 197.6
Dentate gyrus
nTPM: 299.5
2530 Female, age 94, left hemisphere 566.4
2010 Male, age 76, both hemispheres 284.8
2246 Female, age 85, both hemispheres 262.5
2531 Female, age 67, both hemispheres 252.6
2528 Male, age 74, both hemispheres 224.9
1927 Female, age 91, both hemispheres 206.0
Entorhinal gyrus
nTPM: 338.7
2117 Female, age 91, right hemisphere 514.2
2764 Male, age 80, right hemisphere 423.9
2686 Male, age 75, right hemisphere 297.6
1938 Female, age 85, left hemisphere 288.3
2613 Female, age 94, left hemisphere 265.6
1787 Male, age 76, left hemisphere 242.7
Hippocampus, CA1
nTPM: 223.2
2527 Male, age 74, both hemispheres 306.4
2749 Male, age 80, left hemisphere 239.5
1873 Female, age 85, both hemispheres 226.7
2082 Female, age 91, right hemisphere 224.9
2045 Male, age 76, both hemispheres 118.3
Hippocampus, CA2
nTPM: 327.2
1963 Male, age 80, left hemisphere 507.2
2437 Female, age 94, left hemisphere 335.4
2249 Male, age 74, both hemispheres 326.5
1940 Female, age 85, left hemisphere 324.4
2113 Female, age 91, right hemisphere 260.0
1892 Male, age 76, both hemispheres 209.3
Hippocampus, CA3
nTPM: 218.9
1891 Female, age 85, both hemispheres 406.3
1867 Male, age 76, both hemispheres 248.9
2861 Female, age 67, both hemispheres 187.8
2436 Male, age 74, both hemispheres 180.9
2137 Male, age 80, left hemisphere 146.7
2620 Female, age 94, left hemisphere 143.0
Parahippocampal cortex
nTPM: 257.2
1990 Female, age 91, right hemisphere 356.7
2692 Male, age 74, both hemispheres 338.8
2532 Female, age 72, left hemisphere 315.0
1850 Male, age 80, both hemispheres 296.5
1933 Female, age 85, both hemispheres 252.2
2018 Male, age 76, both hemispheres 239.7
2245 Female, age 91, both hemispheres 229.7
2250 Female, age 67, right hemisphere 195.4
2693 Female, age 94, both hemispheres 190.3
2622 Female, age 67, right hemisphere 158.0
Perirhinal gyrus
nTPM: 201.1
1847 Female, age 91, left hemisphere 216.7
2848 Male, age 76, right hemisphere 205.7
1794 Male, age 80, right hemisphere 201.0
1841 Female, age 85, right hemisphere 198.8
2521 Female, age 94, right hemisphere 183.2
Subiculum
nTPM: 367.2
1901 Male, age 80, both hemispheres 475.7
2042 Male, age 76, both hemispheres 442.5
2438 Female, age 94, left hemisphere 386.3
1977 Female, age 85, both hemispheres 383.1
2619 Male, age 74, both hemispheres 269.4
2729 Female, age 91, right hemisphere 246.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 530.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 530.0
Samples: 255

Max nTPM: 1911.6
Min nTPM: 132.6
Std nTPM: 296.2
Median nTPM: 459.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 1911.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1852.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1777.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1587.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 1456.2
GTEX-14E6C-0011-R1a-SM-G8W86 40-49 years, male 1320.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1307.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 1251.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1142.6
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 1111.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 1105.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 334.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 334.5
FF:10153-102I9 76 years, female 452.1
FF:10169-103B7 60 years, female 217.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 179.4
Pig sample Sample description nTPM
Subiculum
nTPM: 90.4
Samples: 4

Max nTPM: 116.9
Min nTPM: 79.0
Sample A Female 116.9
Sample B Female 84.5
Sample C Male 79.0
Sample D Male 81.2
Dorsal hippocampus
nTPM: 179.4
Samples: 4

Max nTPM: 291.1
Min nTPM: 70.3
Sample A Female 291.1
Sample B Female 119.1
Sample C Male 237.2
Sample D Male 70.3
Entorhinal cortex
nTPM: 78.6
Samples: 4

Max nTPM: 98.5
Min nTPM: 67.6
Sample A Female 67.6
Sample B Female 98.5
Sample C Male 80.0
Sample D Male 68.2
Ventral hippocampus
nTPM: 126.9
Samples: 4

Max nTPM: 154.3
Min nTPM: 69.1
Sample A Female 146.4
Sample B Female 69.1
Sample C Male 137.8
Sample D Male 154.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 264.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 165.5
Samples: 4

Max nTPM: 213.5
Min nTPM: 113.6
Sample A Male 213.5
Sample B Male 175.0
Sample C Female 159.9
Sample D Female 113.6
Hippocampal formation
nTPM: 264.7
Samples: 4

Max nTPM: 291.8
Min nTPM: 247.2
Sample A Male 259.4
Sample B Male 260.4
Sample C Female 291.8
Sample D Female 247.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
75042261 Antisense, RP_060412_02_D03, Mouse strain C57BL/6J (56 days, male) 8.1
631703 Antisense, RP_040907_01_A03, Mouse strain C57BL/6J (56 days, male) 7.2

Contact

The Project

The Human Protein Atlas

KAW logo The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.

contact@proteinatlas.org
GCBR logo Elixir core logo SciLifeLab logo Uppsala university logo KI logo KTH logo