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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
465.3
nTPM
HPA Brain:
165.9
nTPM
GTEx:
465.3
nTPM
FANTOM5:
288.6
Scaled Tags Per Million
Pig:
212.6
nTPM
Mouse:
470.0
nTPM
Allen mouse:
6.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
165.9
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 123.2
2019
Male, age 18, unknown
160.0
1870
Female, age 42, unknown
152.9
2219
Male, age 76, both hemispheres
128.3
1827
Male, age 72, unknown
122.9
2411
Female, age 72, unknown
122.1
2666
Male, age 74, left hemisphere
117.2
2586
Male, age 75, left hemisphere
109.7
2828
Female, age 72, unknown
109.3
1833
Male, age 53, unknown
108.8
1830
Male, age 51, unknown
100.5
Dorsal raphe nucleus nTPM: 114.4
1828
Male, age 53, unknown
135.6
2750
Male, age 76, both hemispheres
124.8
2298
Female, age 72, unknown
111.3
2047
Male, age 72, unknown
103.1
2016
Female, age 72, unknown
97.3
Inferior colliculus nTPM: 143.7
1890
Male, age 53, unknown
167.0
2097
Female, age 72, unknown
164.1
1848
Female, age 42, unknown
130.2
2849
Male, age 72, unknown
113.4
Median raphe nucleus nTPM: 116.7
2220
Male, age 76, midline
116.7
Periaquaductal grey, anterior nTPM: 112.2
2502
Female, age 75, unknown
118.3
1947
Male, age 18, unknown
109.6
1795
Male, age 51, unknown
108.7
Periaquaductal grey, dorsal nTPM: 94.7
2850
Male, age 76, both hemispheres
106.7
1831
Male, age 72, unknown
94.4
1840
Male, age 53, unknown
92.7
2464
Female, age 72, unknown
85.1
Periaquaductal grey, lateral nTPM: 87.3
2053
Male, age 18, unknown
95.4
2140
Male, age 76, both hemispheres
86.5
2272
Male, age 74, both hemispheres
80.0
Pretectal area nTPM: 122.0
2007
Male, age 72, unknown
174.4
1817
Female, age 42, unknown
165.3
1944
Female, age 72, unknown
160.2
1816
Male, age 51, unknown
148.6
1815
Male, age 53, unknown
128.8
2667
Female, age 75, unknown
121.3
2224
Female, age 72, unknown
104.1
2316
Male, age 76, right hemisphere
102.1
2825
Male, age 18, unknown
99.5
2273
Male, age 74, both hemispheres
71.1
2407
Male, age 75, both hemispheres
66.6
Red nucleus nTPM: 165.9
2503
Female, age 72, unknown
203.4
2725
Female, age 75, unknown
197.8
1821
Female, age 72, unknown
193.1
2588
Male, age 74, left hemisphere
192.8
1865
Male, age 51, unknown
171.7
2769
Male, age 72, unknown
163.9
1954
Female, age 42, unknown
157.1
2823
Male, age 76, right hemisphere
154.9
2785
Male, age 18, unknown
154.8
2227
Male, age 72, unknown
153.1
1904
Male, age 53, unknown
147.3
2584
Male, age 75, left hemisphere
100.6
Substantia nigra nTPM: 148.9
1916
Female, age 42, unknown
204.8
1889
Female, age 72, unknown
181.1
1851
Male, age 51, unknown
162.6
2409
Female, age 72, unknown
162.3
2665
Male, age 74, both hemispheres
153.8
1941
Male, age 53, unknown
147.8
2241
Male, age 72, unknown
146.3
2699
Male, age 18, unknown
137.6
2583
Male, age 75, right hemisphere
100.3
2590
Female, age 75, unknown
92.1
Superior colliculus nTPM: 110.5
1895
Male, age 76, right hemisphere
144.4
2668
Female, age 75, unknown
126.9
2087
Female, age 72, unknown
121.9
1796
Male, age 53, unknown
121.7
2587
Male, age 74, left hemisphere
120.6
1913
Female, age 42, unknown
116.2
1995
Male, age 72, unknown
103.1
1839
Male, age 51, unknown
101.1
2261
Male, age 18, unknown
99.3
2664
Male, age 75, both hemispheres
50.2
Ventral tegmental area nTPM: 135.7
2223
Female, age 72, unknown
168.2
1915
Female, age 42, unknown
149.4
2218
Male, age 76, both hemispheres
148.2
2410
Female, age 72, unknown
136.7
1942
Male, age 51, unknown
117.7
2021
Male, age 53, unknown
93.9
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
465.3
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 465.3
Samples: 139
Max nTPM: 1324.8
Min nTPM: 221.6
Std nTPM: 156.8
Median nTPM: 437.8
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
1324.8
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
1011.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
883.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
848.4
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
836.3
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
786.4
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
764.9
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
728.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
692.2
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
676.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
654.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
644.4
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
641.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
639.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
628.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
621.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
604.1
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
600.2
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
595.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
592.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
590.5
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
586.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
584.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
576.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
572.5
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
570.6
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
569.7
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
567.9
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
566.9
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
566.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
563.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
562.1
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
556.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
547.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
542.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
542.6
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
541.0
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
535.3
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
530.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
525.7
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
525.3
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
519.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
518.6
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
518.6
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
515.0
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
513.5
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
508.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
506.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
501.4
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
494.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
488.9
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
487.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
478.2
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
477.0
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
475.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
471.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
470.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
470.6
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
469.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
468.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
457.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
455.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
454.3
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
446.3
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
444.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
444.4
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
438.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
438.2
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
437.9
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
437.8
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
436.7
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
435.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
430.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
430.8
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
429.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
426.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
422.4
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
420.3
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
418.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
413.5
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
413.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
412.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
410.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
409.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
409.0
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
408.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
408.7
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
406.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
406.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
402.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
398.8
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
394.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
394.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
394.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
393.8
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
392.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
382.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
381.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
377.1
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
377.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
363.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
363.6
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
363.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
360.0
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
353.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
352.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
352.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
349.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
347.9
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
347.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
343.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
342.8
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
341.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
335.1
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
333.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
329.0
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
328.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
327.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
324.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
316.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
315.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
315.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
311.3
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
305.5
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
305.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
301.5
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
301.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
292.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
288.6
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
272.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
262.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
261.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
260.1
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
257.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
251.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
247.4
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
243.2
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
242.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
221.6
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
470.0
Mouse sample
Sample description
nTPM
Midbrain nTPM: 470.0
Samples: 4
Max nTPM: 517.7
Min nTPM: 439.0
Sample A
Male
517.7
Sample B
Male
442.1
Sample C
Female
439.0
Sample D
Female
481.3
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.