HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.8 nTPM
HPA Brain:28.9 nTPM
GTEx:8.8 nTPM
FANTOM5:1.0 Scaled Tags Per Million
Pig:22.5 nTPM
Mouse:17.8 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
2621 Female, age 67, right hemisphere 30.9
2529 Female, age 94, left hemisphere 30.0
2148 Female, age 91, left hemisphere 29.0
1898 Male, age 80, left hemisphere 26.6
1911 Female, age 85, right hemisphere 25.2
1855 Male, age 76, left hemisphere 24.2
Dentate gyrus
nTPM: 26.3
2530 Female, age 94, left hemisphere 30.8
2010 Male, age 76, both hemispheres 28.3
2531 Female, age 67, both hemispheres 26.9
2246 Female, age 85, both hemispheres 25.2
2528 Male, age 74, both hemispheres 24.1
1927 Female, age 91, both hemispheres 22.7
Entorhinal gyrus
nTPM: 28.6
2117 Female, age 91, right hemisphere 29.8
1938 Female, age 85, left hemisphere 29.7
2764 Male, age 80, right hemisphere 29.7
2613 Female, age 94, left hemisphere 28.5
1787 Male, age 76, left hemisphere 27.1
2686 Male, age 75, right hemisphere 26.9
Hippocampus, CA1
nTPM: 27.0
2045 Male, age 76, both hemispheres 30.0
1873 Female, age 85, both hemispheres 28.4
2749 Male, age 80, left hemisphere 28.1
2527 Male, age 74, both hemispheres 25.8
2082 Female, age 91, right hemisphere 22.4
Hippocampus, CA2
nTPM: 27.1
2437 Female, age 94, left hemisphere 28.9
1940 Female, age 85, left hemisphere 28.7
1963 Male, age 80, left hemisphere 27.4
1892 Male, age 76, both hemispheres 26.8
2113 Female, age 91, right hemisphere 25.6
2249 Male, age 74, both hemispheres 24.9
Hippocampus, CA3
nTPM: 25.5
2620 Female, age 94, left hemisphere 29.9
1891 Female, age 85, both hemispheres 28.9
1867 Male, age 76, both hemispheres 27.4
2137 Male, age 80, left hemisphere 22.9
2436 Male, age 74, both hemispheres 22.8
2861 Female, age 67, both hemispheres 21.3
Parahippocampal cortex
nTPM: 26.8
1850 Male, age 80, both hemispheres 31.4
2692 Male, age 74, both hemispheres 29.3
2532 Female, age 72, left hemisphere 28.7
1933 Female, age 85, both hemispheres 27.9
2018 Male, age 76, both hemispheres 27.4
2245 Female, age 91, both hemispheres 25.6
2693 Female, age 94, both hemispheres 25.6
1990 Female, age 91, right hemisphere 25.1
2622 Female, age 67, right hemisphere 23.6
2250 Female, age 67, right hemisphere 23.1
Perirhinal gyrus
nTPM: 27.4
2848 Male, age 76, right hemisphere 31.0
1841 Female, age 85, right hemisphere 30.2
1794 Male, age 80, right hemisphere 29.5
2521 Female, age 94, right hemisphere 24.1
1847 Female, age 91, left hemisphere 22.4
Subiculum
nTPM: 28.9
1901 Male, age 80, both hemispheres 34.7
2619 Male, age 74, both hemispheres 30.4
2438 Female, age 94, left hemisphere 28.6
2042 Male, age 76, both hemispheres 28.5
1977 Female, age 85, both hemispheres 26.7
2729 Female, age 91, right hemisphere 24.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 18.5
Min nTPM: 5.1
Std nTPM: 1.8
Median nTPM: 8.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 18.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 16.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 15.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 14.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 13.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 13.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 13.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 12.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 12.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 11.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.0
FF:10169-103B7 60 years, female 1.0
FF:10153-102I9 76 years, female 1.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.5
Pig sample Sample description nTPM
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 26.8
Min nTPM: 20.3
Sample A Female 26.8
Sample B Female 21.5
Sample C Male 20.9
Sample D Male 20.3
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 25.0
Min nTPM: 19.2
Sample A Female 25.0
Sample B Female 21.8
Sample C Male 23.8
Sample D Male 19.2
Entorhinal cortex
nTPM: 22.4
Samples: 4

Max nTPM: 23.5
Min nTPM: 20.3
Sample A Female 22.4
Sample B Female 23.4
Sample C Male 23.5
Sample D Male 20.3
Ventral hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 22.2
Min nTPM: 19.7
Sample A Female 22.2
Sample B Female 19.7
Sample C Male 19.9
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.2
Sample A Male 19.7
Sample B Male 19.1
Sample C Female 18.1
Sample D Female 14.2
Hippocampal formation
nTPM: 17.6
Samples: 4

Max nTPM: 22.0
Min nTPM: 14.9
Sample A Male 22.0
Sample B Male 17.7
Sample C Female 14.9
Sample D Female 15.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
69981019 Antisense, RP_050512_04_E04, Mouse strain C57BL/6J (56 days, male) 1.2

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