HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.7 nTPM
HPA Brain:95.8 nTPM
GTEx:22.7 nTPM
FANTOM5:80.9 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:10.7 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038225Antibody HPA038614
Glial cells LowNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 95.8
Sample id Sample description nTPM
Hippocampus
nTPM: 87.7
2529 Female, age 94, left hemisphere 105.2
1855 Male, age 76, left hemisphere 86.4
1911 Female, age 85, right hemisphere 85.6
2621 Female, age 67, right hemisphere 85.5
2148 Female, age 91, left hemisphere 85.2
1898 Male, age 80, left hemisphere 78.2
Dentate gyrus
nTPM: 90.2
2010 Male, age 76, both hemispheres 102.4
2531 Female, age 67, both hemispheres 98.9
2530 Female, age 94, left hemisphere 89.1
2528 Male, age 74, both hemispheres 87.5
2246 Female, age 85, both hemispheres 86.5
1927 Female, age 91, both hemispheres 76.7
Entorhinal gyrus
nTPM: 86.9
1787 Male, age 76, left hemisphere 92.7
2764 Male, age 80, right hemisphere 92.0
2686 Male, age 75, right hemisphere 91.8
2613 Female, age 94, left hemisphere 83.9
1938 Female, age 85, left hemisphere 80.7
2117 Female, age 91, right hemisphere 80.7
Hippocampus, CA1
nTPM: 89.9
2045 Male, age 76, both hemispheres 100.7
2749 Male, age 80, left hemisphere 93.0
2082 Female, age 91, right hemisphere 90.2
2527 Male, age 74, both hemispheres 86.5
1873 Female, age 85, both hemispheres 79.0
Hippocampus, CA2
nTPM: 83.9
1940 Female, age 85, left hemisphere 95.7
2437 Female, age 94, left hemisphere 90.9
2113 Female, age 91, right hemisphere 86.3
1963 Male, age 80, left hemisphere 84.3
2249 Male, age 74, both hemispheres 81.8
1892 Male, age 76, both hemispheres 64.6
Hippocampus, CA3
nTPM: 95.8
2436 Male, age 74, both hemispheres 125.4
2620 Female, age 94, left hemisphere 108.1
2861 Female, age 67, both hemispheres 107.8
2137 Male, age 80, left hemisphere 86.7
1867 Male, age 76, both hemispheres 76.4
1891 Female, age 85, both hemispheres 70.4
Parahippocampal cortex
nTPM: 85.0
2018 Male, age 76, both hemispheres 104.1
2532 Female, age 72, left hemisphere 100.1
2622 Female, age 67, right hemisphere 98.2
2692 Male, age 74, both hemispheres 86.1
1990 Female, age 91, right hemisphere 81.2
2693 Female, age 94, both hemispheres 79.9
2245 Female, age 91, both hemispheres 77.1
1933 Female, age 85, both hemispheres 77.0
2250 Female, age 67, right hemisphere 76.6
1850 Male, age 80, both hemispheres 69.7
Perirhinal gyrus
nTPM: 78.4
1794 Male, age 80, right hemisphere 86.3
2848 Male, age 76, right hemisphere 80.4
1847 Female, age 91, left hemisphere 75.8
1841 Female, age 85, right hemisphere 75.4
2521 Female, age 94, right hemisphere 74.2
Subiculum
nTPM: 87.9
2619 Male, age 74, both hemispheres 97.4
2438 Female, age 94, left hemisphere 95.9
2042 Male, age 76, both hemispheres 90.4
2729 Female, age 91, right hemisphere 89.2
1977 Female, age 85, both hemispheres 81.1
1901 Male, age 80, both hemispheres 73.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 22.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.7
Samples: 197

Max nTPM: 43.1
Min nTPM: 10.0
Std nTPM: 4.9
Median nTPM: 22.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 43.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 42.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 39.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 38.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 34.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 34.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 32.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 31.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 31.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 31.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 30.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 80.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 80.9
FF:10153-102I9 76 years, female 84.0
FF:10169-103B7 60 years, female 77.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 32.5
Pig sample Sample description nTPM
Subiculum
nTPM: 31.2
Samples: 4

Max nTPM: 38.7
Min nTPM: 28.0
Sample A Female 38.7
Sample B Female 28.2
Sample C Male 30.0
Sample D Male 28.0
Dorsal hippocampus
nTPM: 27.6
Samples: 4

Max nTPM: 30.8
Min nTPM: 23.9
Sample A Female 30.8
Sample B Female 27.0
Sample C Male 28.6
Sample D Male 23.9
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 36.3
Min nTPM: 30.3
Sample A Female 36.3
Sample B Female 31.2
Sample C Male 32.2
Sample D Male 30.3
Ventral hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 33.3
Min nTPM: 24.2
Sample A Female 27.8
Sample B Female 24.2
Sample C Male 33.3
Sample D Male 27.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 10.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 12.2
Min nTPM: 8.9
Sample A Male 12.2
Sample B Male 11.7
Sample C Female 8.9
Sample D Female 9.9
Hippocampal formation
nTPM: 8.2
Samples: 4

Max nTPM: 10.4
Min nTPM: 6.0
Sample A Male 7.3
Sample B Male 8.9
Sample C Female 6.0
Sample D Female 10.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
69262349 Antisense, RP_050303_02_C07, Mouse strain C57BL/6J (56 days, male) 4.5

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