HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:10.6 nTPM
HPA Brain:24.9 nTPM
GTEx:10.6 nTPM
FANTOM5:33.2 Scaled Tags Per Million
Pig:22.0 nTPM
Mouse:15.1 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035796Antibody HPA035797
Glial cells LowNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 24.9
Sample id Sample description nTPM
Hippocampus
nTPM: 24.5
2148 Female, age 91, left hemisphere 27.5
2529 Female, age 94, left hemisphere 25.1
2621 Female, age 67, right hemisphere 25.0
1911 Female, age 85, right hemisphere 24.9
1855 Male, age 76, left hemisphere 23.0
1898 Male, age 80, left hemisphere 21.7
Dentate gyrus
nTPM: 24.7
2531 Female, age 67, both hemispheres 27.6
1927 Female, age 91, both hemispheres 26.8
2246 Female, age 85, both hemispheres 24.3
2010 Male, age 76, both hemispheres 23.8
2530 Female, age 94, left hemisphere 23.5
2528 Male, age 74, both hemispheres 22.5
Entorhinal gyrus
nTPM: 24.9
2686 Male, age 75, right hemisphere 27.5
2613 Female, age 94, left hemisphere 25.7
2117 Female, age 91, right hemisphere 24.7
2764 Male, age 80, right hemisphere 24.4
1938 Female, age 85, left hemisphere 23.7
1787 Male, age 76, left hemisphere 23.5
Hippocampus, CA1
nTPM: 24.4
1873 Female, age 85, both hemispheres 27.2
2749 Male, age 80, left hemisphere 25.8
2527 Male, age 74, both hemispheres 24.0
2045 Male, age 76, both hemispheres 22.5
2082 Female, age 91, right hemisphere 22.4
Hippocampus, CA2
nTPM: 24.5
1963 Male, age 80, left hemisphere 28.0
1892 Male, age 76, both hemispheres 27.4
2437 Female, age 94, left hemisphere 24.4
2113 Female, age 91, right hemisphere 24.0
1940 Female, age 85, left hemisphere 21.7
2249 Male, age 74, both hemispheres 21.7
Hippocampus, CA3
nTPM: 24.6
2620 Female, age 94, left hemisphere 27.7
2861 Female, age 67, both hemispheres 26.1
2137 Male, age 80, left hemisphere 25.3
1891 Female, age 85, both hemispheres 25.0
1867 Male, age 76, both hemispheres 21.9
2436 Male, age 74, both hemispheres 21.8
Parahippocampal cortex
nTPM: 22.9
2622 Female, age 67, right hemisphere 25.9
2693 Female, age 94, both hemispheres 25.3
1990 Female, age 91, right hemisphere 24.1
2532 Female, age 72, left hemisphere 23.8
2245 Female, age 91, both hemispheres 23.1
2692 Male, age 74, both hemispheres 22.9
1933 Female, age 85, both hemispheres 21.8
2018 Male, age 76, both hemispheres 21.7
2250 Female, age 67, right hemisphere 20.6
1850 Male, age 80, both hemispheres 20.0
Perirhinal gyrus
nTPM: 21.4
1841 Female, age 85, right hemisphere 22.4
2848 Male, age 76, right hemisphere 22.4
2521 Female, age 94, right hemisphere 22.1
1794 Male, age 80, right hemisphere 21.7
1847 Female, age 91, left hemisphere 18.2
Subiculum
nTPM: 23.7
2619 Male, age 74, both hemispheres 25.7
1901 Male, age 80, both hemispheres 24.5
2042 Male, age 76, both hemispheres 24.3
2438 Female, age 94, left hemisphere 24.3
2729 Female, age 91, right hemisphere 22.1
1977 Female, age 85, both hemispheres 21.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.6
Samples: 197

Max nTPM: 26.0
Min nTPM: 2.6
Std nTPM: 3.4
Median nTPM: 10.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 21.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 19.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 19.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 19.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 18.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 18.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 18.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 17.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 16.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 16.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 33.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 33.2
FF:10153-102I9 76 years, female 39.5
FF:10169-103B7 60 years, female 27.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 22.0
Pig sample Sample description nTPM
Subiculum
nTPM: 19.1
Samples: 4

Max nTPM: 23.0
Min nTPM: 16.3
Sample A Female 23.0
Sample B Female 19.8
Sample C Male 17.4
Sample D Male 16.3
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 25.6
Min nTPM: 16.3
Sample A Female 25.6
Sample B Female 20.6
Sample C Male 25.5
Sample D Male 16.3
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 19.1
Min nTPM: 16.9
Sample A Female 17.7
Sample B Female 19.1
Sample C Male 18.2
Sample D Male 16.9
Ventral hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 23.3
Min nTPM: 16.3
Sample A Female 20.4
Sample B Female 16.3
Sample C Male 23.3
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 15.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.7
Min nTPM: 13.6
Sample A Male 16.1
Sample B Male 14.0
Sample C Female 13.6
Sample D Female 16.7
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.5
Sample A Male 12.5
Sample B Male 15.0
Sample C Female 16.6
Sample D Female 13.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
176778 Antisense, RP_040604_01_F05, Mouse strain C57BL/6J (56 days, male) 8.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org