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  • TISSUE

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  • ARF1
TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BLOOD VESSEL BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON
DUODENUM ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
NASOPHARYNX ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN
SMALL INTESTINE SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
Tissue methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:246.3 nTPM
HPA Brain:304.2 nTPM
GTEx:246.3 nTPM
Pig:268.6 nTPM
Mouse:355.8 nTPM
Allen mouse:19.1 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.2
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 304.2
2226 Male, age 75, left hemisphere 334.3
1961 Female, age 42, unknown 274.1
Dorsomedial nucleus
nTPM: 244.1
1989 Male, age 62, unknown 265.6
2041 Female, age 72, unknown 249.6
2017 Female, age 42, unknown 216.9
Lateral hypothalamic area
nTPM: 276.2
2271 Male, age 75, both hemispheres 319.7
2228 Male, age 66, unknown 286.8
1791 Male, age 80, right hemisphere 279.2
2412 Male, age 62, unknown 219.3
Mammillary body
nTPM: 230.6
1923 Female, age 72, unknown 278.8
2413 Male, age 66, unknown 246.9
1948 Female, age 72, unknown 218.8
1945 Male, age 80, right hemisphere 204.9
1834 Female, age 42, unknown 203.6
Paraventricular nucleus
nTPM: 226.5
2700 Male, age 62, unknown 226.5
Preoptic area
nTPM: 226.8
1907 Male, age 80, right hemisphere 253.5
1861 Female, age 42, unknown 217.9
2414 Female, age 72, unknown 209.0
Supraoptic nucleus
nTPM: 230.2
2835 Female, age 72, unknown 245.7
1894 Female, age 72, unknown 225.7
2043 Male, age 62, unknown 219.3
Ventromedial nucleus
nTPM: 273.8
1982 Female, age 72, unknown 300.0
1822 Female, age 42, unknown 247.6

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 246.3
Samples: 257

Max nTPM: 367.9
Min nTPM: 137.1
Std nTPM: 45.7
Median nTPM: 245.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 367.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 363.2
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 349.4
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 348.4
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 346.0
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 345.1
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 344.3
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 342.4
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 338.9
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 338.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 335.8
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 334.6
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 332.3
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 332.0
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 326.6
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 324.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 323.6
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 321.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 317.9
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 317.8
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 317.1
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 312.1
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 311.8
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 310.5
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 310.1
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 310.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 308.8
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 307.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 305.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 303.6
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 303.2
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 303.0
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 302.6
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 301.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 300.6
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 300.1
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 297.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 296.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 294.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 294.3
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 293.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 292.9
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 292.4
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 292.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 292.0
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 291.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 289.9
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 287.2
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 286.7
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 286.5
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 286.4
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 285.0
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 284.8
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 284.0
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 283.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 282.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 281.3
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 280.8
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 280.4
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 280.0
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 279.2
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 278.8
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 276.6
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 274.8
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 274.4
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 272.8
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 272.7
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 272.3
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 271.4
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 271.2
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 271.1
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 269.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 268.4
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 268.0
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 267.7
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 267.2
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 266.5
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 265.7
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 265.7
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 265.4
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 265.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 264.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 263.2
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 263.0
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 262.5
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 262.1
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 262.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 261.8
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 259.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 259.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 259.6
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 259.3
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 259.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 259.2
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 259.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 258.5
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 258.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 258.1
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 258.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 257.9
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 257.7
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 257.4
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 257.0
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 255.4
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 255.3
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 255.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 254.9
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 254.7
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 254.0
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 253.9
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 253.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 253.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 252.7
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 252.2
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 252.2
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 252.0
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 251.5
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 251.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 250.8
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 248.9
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 248.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 248.7
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 247.1
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 247.0
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 247.0
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 246.9
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 245.8
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 245.3
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 245.1
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 245.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 244.2
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 243.9
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 243.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 243.3
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 243.2
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 242.9
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 242.5
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 241.7
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 240.6
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 240.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 239.8
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 239.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 239.7
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 239.6
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 238.2
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 237.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 236.6
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 235.0
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 235.0
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 234.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 234.0
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 233.0
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 232.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 232.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 231.8
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 231.4
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 230.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 230.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 230.2
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 230.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 228.9
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 228.5
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 228.2
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 228.1
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 227.8
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 227.6
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 227.0
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 226.8
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 226.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 225.9
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 225.9
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 225.4
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 224.7
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 224.3
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 223.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 223.2
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 222.6
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 221.7
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 221.2
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 219.7
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 218.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 218.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 218.1
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 217.3
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 216.7
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 216.6
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 216.3
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 215.8
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 215.4
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 214.9
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 213.9
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 213.3
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 212.6
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 211.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 211.3
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 210.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 209.8
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 209.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 209.3
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 208.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 208.4
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 207.9
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 207.7
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 207.6
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 207.5
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 207.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 207.2
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 206.1
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 205.3
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 204.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 202.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 202.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 201.6
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 200.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 199.6
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 198.4
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 197.9
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 197.8
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 197.2
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 194.1
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 193.8
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 193.6
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 193.4
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 192.9
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 190.9
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 190.5
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 189.9
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 189.7
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 188.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 187.5
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 186.5
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 186.0
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 184.0
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 183.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 182.6
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 182.2
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 182.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 181.5
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 181.4
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 180.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 179.8
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 179.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 177.6
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 177.6
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 176.2
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 175.4
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 175.4
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 174.8
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 174.7
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 170.9
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 169.2
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 162.2
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 159.7
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 157.5
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 157.3
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 154.2
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 137.1
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

268.6
Pig sample Sample description nTPM
Hypothalamus
nTPM: 268.6
Samples: 4

Max nTPM: 334.1
Min nTPM: 210.1
Sample A Female 334.1
Sample B Female 266.7
Sample C Male 263.4
Sample D Male 210.1

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

355.8
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 355.8
Samples: 4

Max nTPM: 390.7
Min nTPM: 336.1
Sample A Male 353.1
Sample B Male 390.7
Sample C Female 343.4
Sample D Female 336.1

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.1
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 19.1
199390 Antisense, RP_040507_02_D11, Mouse strain C57BL/6J (56 days, male) 25.9
77414125 Antisense, RP_070205_01_E12, Mouse strain C57BL/6J (56 days, male) 12.3
77620391 Antisense, RP_070205_01_E12, Mouse strain C57BL/6J (56 days, male) 12.1

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